Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1866 ATGGCTTCTTGGGTAAGAGGCGAGTGTATCGGTAAGGGCGCGTTTGGCACCGTGAGTGTTGCGATTGACAAATGGGACGGTCGGGTTTTTGCCGTGAAATCCGTGGATCTTAAGACGGGTCTCCCGGCTCAGGTGGAGGCTTTGGAGAATGAGATTCGGATTCTCCGGCGGGTTTCGCCGTCGCCCTACGTGGTGGGGTTCCTCGGCGACGATGTTACGGCGTCGTATCGAAATTTGCACATGGAGTACATGCCGGGTGGCACGCTCGCTGACCTGGCGTCTCGGGACGCTGACGTGGACGAGGGGTTAGTGAGGTTCTATACCTGGTGCCTCGTGAACGCGCTGAGGCACGTCCATTCGAAGGGCGTCGTGCACTGCGACGTGAAGGGGAGGAACGTTCTGGTGGGGCCCAACGGCTGCGTCGCAAAGCTCGCCGATTTCGGCTCGGCGGTCGATGTCTCCGGCCAAGCCAGCTCCTCGGCGATTTTGCCACGTGGGAGCCCGCTGTGGATGGCCCCGGAGGTGATCCGGGGGGAGTCTCAGGGGCCGGAATCAGACGTGTGGTCCTTGGGATGCACGGTGATCGAGATGGTCAACGGGAAGCCGGCGTGGGAGGACCACGGCGGCGACACGCTGAGTCGAATCGGGTTCTCCAGCGGTATACCCGAGTTCCCGGGTCAGTTGTCAGAGCTGGGGCGCGATTTCCTCGACAAGTGTCTGAGGAGGGAACCGAAGAAGCGGTGGAGTTGCGATCAGCTGCTGCAGCACCCATTTCTGTCATCCAATCCTCCCCAGAAGTTGGTGGAGTCATCTCCCCGTTGCGTTCTTGACTGGGCTATCTCAGAGTTCGCCGAAGAAGACGAAGAAGGGGAAATCAGATTTGAAGGCAATGCTGAAAGTTCTGCAAAGGAGAGAATTAATAAATTAGCAACTAAATTGAGGGCAGATTGGGAAACGGAGGGTTGGGTGGCGGTGAGGGAACTGACATCAGACGCAGAAGCAACAACAACGGAAACAGGGGATGGTGATAGTGGGAGTGGGGACGAAGGAGAAGGGACAAGTTGGGAATATCCGTATTGGACAGGGGTAGAAGAGGAAATGAACGTGGGGACAAGTTGGGAATATCCGGATAATGTAAGAAGAGCAAAATCAGAAAGGGCAAATCCGGATAAAAGGGAATTTGATGGCAAGAGGCGGTTGGCGTGGCGGTGTGATCACAGGGATTGCAATGAGAGGAGCATGGCTGGTTGGAGCTGTCGGTATGGCTCAGAAAACGTAGATTCAGATTCAGTAGCGAGGACAAGAGTAATAATAAGCATTTACTATTTGTGTTGTAAATTATTAAAATCATGTTATTTAAATCCTGTATCAATAAATCCCAATATATTATTTTCTCGAATTATTAATATTCTATACTTTTTTCATCAACATGTGCCGAAGACATGTTTTGTACAGCGGCATTTATGTTGTGTTCTATCGAAAAGAACACATTATTGCATCTCACAATTAACCTAA 1515 0.5221 MASWVRGECIGKGAFGTVSVAIDKWDGRVFAVKSVDLKTGLPAQVEALENEIRILRRVSPSPYVVGFLGDDVTASYRNLHMEYMPGGTLADLASRDADVDEGLVRFYTWCLVNALRHVHSKGVVHCDVKGRNVLVGPNGCVAKLADFGSAVDVSGQASSSAILPRGSPLWMAPEVIRGESQGPESDVWSLGCTVIEMVNGKPAWEDHGGDTLSRIGFSSGIPEFPGQLSELGRDFLDKCLRREPKKRWSCDQLLQHPFLSSNPPQKLVESSPRCVLDWAISEFAEEDEEGEIRFEGNAESSAKERINKLATKLRADWETEGWVAVRELTSDAEATTTETGDGDSGSGDEGEGTSWEYPYWTGVEEEMNVGTSWEYPDNVRRAKSERANPDKREFDGKRRLAWRCDHRDCNERSMAGWSCRYGSENVDSDSVARTRVIISIYYLCCKLLKSCYLNPVSINPNILFSRIINILYFFHQHVPKTCFVQRHLCCVLSKRTHYCISQLT 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1866 504 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dere04g1866 504 SUPERFAMILY Protein kinase-like (PK-like) 4 276 IPR011009 -
Dere04g1866 504 Pfam Protein kinase domain 6 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1866 504 CDD STKc_MAPKKK 3 259 - -
Dere04g1866 504 FunFam Serine threonine protein kinase putative 2 310 - -
Dere04g1866 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Dere04g1866 504 Gene3D Transferase(Phosphotransferase) domain 1 2 330 - -
Dere04g1866 504 ProSiteProfiles Protein kinase domain profile. 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1866 504 SMART serkin_6 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1866 504 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 330 - -
Dere04g1866 504 MobiDBLite consensus disorder prediction 327 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1866 Dere-ChrDere04 21399863 21401377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1866 4 338 MAP Kinase Kinase Kinase AT1G07150 59.587 4.93e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere04g1866 Pkinase 3.1e-57 CL0016