Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1865 ATGCCTTGCTCCGTAGTCGTCCCCAATTCTCCGGGCTTCTCTCCCTCTTCTCTCTTCTGCAACATGAACTCTATTATCTCTCCCTCTGCTGAATCTCTCGCGCAACTTAAGTCTTCACAACCCCCGTCTTCTCCTTCGTCGACCTTCTCCTCGTCCTCCTCTTTCGGCTTTCGGCTCCCGAAACCTCCGAATGAGTTTTTCAATTCGGGCTCTGCATCGCCTTCGACTTCCGCTCTCTCATCGTCCACCTCGCCGACTAGCTCCCTCTTGAAGAGGAAGAGACCCGCGAGGCTTGATATTCCCGTTACGTCTTTCGCTTTTGGGGCTTCGGTGACACCGTCTGCGGCGGCTCGGGATTCCGTGGAGGTTGAAGGACACGGGTTTTCTGTGTATTGCAAGAGGGGAAGGAGGGAGTTCATGGAGGATCGTTACTCCGCTACCGTTAATCTTCAAGGAAAACCTAAGCAGGCTTTCTTTGGGATATTTGATGGGCATGGAGGAGCAAAAGCTGCAGAATTTGCTGCTCAAAACTTAGAAAAGAATATCTTGGAAGAAGTGATCAGGAGGAGTGACGAACATGATGATGACATTGAGGAGGCAGTGAAGCATGGTTACCTGACCACAGATACTGAGTTCCTGAAAGAGGACATCCGAGGTGGTTCTTCTTGTGTGACAGCATTGATTAGGAATGGCAAACTCATTGTGTCCAATGCCGGTGATTGTCGCGCTGTCGTTTGCCGAAGAGGCGCTGCCGAGGCCCTCACATCTGATCACCGGCCCTCAAGGGAAGACGAGAGGGACAGAATAGAAGCTCTGGGTGGCTATGTTGATCTATGCCATGGAGTTTGGAGGATCCAAGGTTCTCTAGCTGTGTCTCGAGGAATCGGAGATGGACACCTGAAGCAGTGGGTGACACCTGAACCTGAGACTGAAGTTCTCAAAATTGAACCTGAACATGACCTTTTAATACTAGCTTCTGATGGATTATGGGACAAGGTTACTAATCAGGAAGCAGTGGATATTGCTCGTTCTTTTTGCGTAGAGAGTGATAGACCACAGCCATTGCTGGCCTGTAAAAAGCTTGTTCATTTGTCTGTGTCTCGAGGCTCTTTTGATGATATAAGCGTTATGCTAATCAAGCTGGATCACTATGTATGA 1158 0.494 MPCSVVVPNSPGFSPSSLFCNMNSIISPSAESLAQLKSSQPPSSPSSTFSSSSSFGFRLPKPPNEFFNSGSASPSTSALSSSTSPTSSLLKRKRPARLDIPVTSFAFGASVTPSAAARDSVEVEGHGFSVYCKRGRREFMEDRYSATVNLQGKPKQAFFGIFDGHGGAKAAEFAAQNLEKNILEEVIRRSDEHDDDIEEAVKHGYLTTDTEFLKEDIRGGSSCVTALIRNGKLIVSNAGDCRAVVCRRGAAEALTSDHRPSREDERDRIEALGGYVDLCHGVWRIQGSLAVSRGIGDGHLKQWVTPEPETEVLKIEPEHDLLILASDGLWDKVTNQEAVDIARSFCVESDRPQPLLACKKLVHLSVSRGSFDDISVMLIKLDHYV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1865 385 SMART PP2C_SIG_2 135 381 IPR001932 -
Dere04g1865 385 MobiDBLite consensus disorder prediction 66 90 - -
Dere04g1865 385 Gene3D - 120 385 IPR036457 -
Dere04g1865 385 PANTHER PROTEIN PHOSPHATASE 2C 82 379 IPR015655 GO:0004722|GO:0006470
Dere04g1865 385 SMART PP2C_4 115 379 IPR001932 -
Dere04g1865 385 FunFam probable protein phosphatase 2C 25 120 384 - -
Dere04g1865 385 Pfam Protein phosphatase 2C 129 373 IPR001932 -
Dere04g1865 385 MobiDBLite consensus disorder prediction 33 58 - -
Dere04g1865 385 ProSitePatterns PPM-type phosphatase domain signature. 158 166 IPR000222 GO:0043169
Dere04g1865 385 MobiDBLite consensus disorder prediction 33 92 - -
Dere04g1865 385 SUPERFAMILY PP2C-like 126 382 IPR036457 -
Dere04g1865 385 ProSiteProfiles PPM-type phosphatase domain profile. 127 381 IPR001932 -
Dere04g1865 385 CDD PP2Cc 127 381 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1865 Dere-ChrDere04 21386341 21388058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1865 1 385 PP2C-type Phosphatase Gene Family AT2G30020 59.750 1.60e-153 437
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1865 04 21386341 21388058 Dere05g0108 05 1478704 1480807 CCT
Dere04g1865 04 21386341 21388058 Dere04g1865 04 21386341 21388058 ECH
Dere04g1865 04 21386341 21388058 Dere05g0108 05 1478704 1480807 ECH