Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1852 ATGCCGTTCCACTCATCATTGTTTTGTATACTGTCCCCTAGTATTAGTGTTGTAACGCGCCCCGAGAGCGTGCTTGTGTTTGCAGAAAACAGGGAAAATAGGAAGCCCAATTTTAGCAAAAATGACTTGTCATCGCGCGTGGCGACACCCACTGAACTACTTGTCTCTCCTTCTCTTCTCACGTTCAAATCCCAATCCCGCCATCTCTCTCTCTCATATGTCCCAATTCAAATCTCACTTTTATTGCTTTCTCCTTTCGAACCCATTCTTGCTTTTACCATCACACTGCAATCTGAATGGAAGTTTGAGATTCCACTCCTCTTTGGCTTTTCCTTTTTCTTTTTCTCTGCTTTACCATCATCCCATATGAGCATGAAGAAGAAGAACAAGCTCTTACCTTCTCATTTTTCTTCACCATCGTCATCATCATCTTCTTCTTCTTATTCGTCTTTCGACCACACCATGTGCACCTCGAAGAAAGCCACCGCAGGTTGTCTAACTGGCATCCTGCGCAGGATCCTCTGTTCTCGCGGTCTTCCAACACACCCCTCGGATCAAATGACGGACGATCATGAATTCAAGGCTACGCTGAAGATTGAGGTTGATTCTGTGACTACTGCTACTACTACTCGTTCTGCTCCTGGGATTGTCGCGAGGTTGATGGGTTTAGAATCGACTGTGGAAATGGAAATGCCCGCTGAATCATCCGCCCCTTCGCTTTCGCGAAGTCGGTCTATGAACTCCGTGGAATGCTTCGGGGAATGCGATCGAATGCAGGGGATTCATCGGAGGGTGAAATCCACGTTGTCGGTTCGGGAAGTTCCAGGTTTTCTGTTGCTGGAAAACGAGAAATTCTTGGTGCTCACCTTCGAAGGAGGAGAATTCGAATCCAGAGGGAGGAAAAGAGAAATGGCTTCTGCGGAATTGAAGCTGAGACGGAAATCGAAGGAAAATAGGAGAGAAAAGGTGTCGTCTGAGAAAATTTTGAATGAAGAGGAAGAGAAACAGAGCAGAAGGCTGTTTGATGAAATGTCTCTCAGACAAAATGATGGTAAGCTTCGAGAAGTTACCAACATTCTGCCTCTTTCCAACTTCAAGGTTGCTTCTGAAATGAAGTGTATTGATTCAGAAGTAGAGAAGTTCAAGGAGGTTCCTGATGGTAAGAAACTGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAAACATGCTGTAATTGCACTGCAAAGAAGACAGAACTTGAGTGCAATTCAGAAGATTCAAGCCCAGTTTCTGTCCTTGATTTTAATCGCCACGTTCCTGGATCAGAGGTAGATTCTTCAGGGGTCAGTTTGAGTTCAAGAAGGAAGTTGTCACCAGAGCTTGAAAACGGCCAACACTTGCCTCTGCGTTTTGATGGAAACTTGATGATCGAACAGAGTAAGGTGAAGGCGAACGAAGGGCAGAAACATGAGGGATCAAAGAGAAAAGAGAAGCAGAGGCAGGAGTACATAGACATGTGGGCTGAAATCTGCAGAAAAGCAGGAGATGAATTAGTAGGATCAAACCATATTTGGGAAGAAGGTGACTGGGAAAGTATAAGTGAAGATTTCGAGTCACAAATTTTTGATCACTTAGTAAATGAGCTCATAGACCAACTGCTTGTTGGATAG 1647 0.4469 MPFHSSLFCILSPSISVVTRPESVLVFAENRENRKPNFSKNDLSSRVATPTELLVSPSLLTFKSQSRHLSLSYVPIQISLLLLSPFEPILAFTITLQSEWKFEIPLLFGFSFFFFSALPSSHMSMKKKNKLLPSHFSSPSSSSSSSSYSSFDHTMCTSKKATAGCLTGILRRILCSRGLPTHPSDQMTDDHEFKATLKIEVDSVTTATTTRSAPGIVARLMGLESTVEMEMPAESSAPSLSRSRSMNSVECFGECDRMQGIHRRVKSTLSVREVPGFLLLENEKFLVLTFEGGEFESRGRKREMASAELKLRRKSKENRREKVSSEKILNEEEEKQSRRLFDEMSLRQNDGKLREVTNILPLSNFKVASEMKCIDSEVEKFKEVPDGKKLKRRRRKRKKKTCCNCTAKKTELECNSEDSSPVSVLDFNRHVPGSEVDSSGVSLSSRRKLSPELENGQHLPLRFDGNLMIEQSKVKANEGQKHEGSKRKEKQRQEYIDMWAEICRKAGDELVGSNHIWEEGDWESISEDFESQIFDHLVNELIDQLLVG 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1852 548 Pfam DUF761-associated sequence motif 213 225 IPR032795 -
Dere04g1852 548 Coils Coil 306 326 - -
Dere04g1852 548 PANTHER OS05G0128300 PROTEIN 149 546 - -
Dere04g1852 548 MobiDBLite consensus disorder prediction 435 450 - -
Dere04g1852 548 MobiDBLite consensus disorder prediction 433 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1852 Dere-ChrDere04 21216097 21217838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1852 158 546 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 31.458 2.53e-26 108