Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1848 ATGACAAATCCACCCTCCTCTCTTCTTCCTTTCTCCTTTGTCTTAATCATCTTCGCCATATTCTTCTCTCTGGCGTTCCCAACCGACGTCAACGGCCTCGGCTCCGCCTCCACCACCGCCATCACCTACGGCACCGGCACCGTCTGTGGCATTGTAGCCGGCGAGTTCACGCAGAGAATCCAGTGTTATCAGGATGGCCAAACTCTCCAAGTCCTTCCCAATGTCTCCTTCCAAGCCATCTCCGGCGGCCGGAGCTTCTTCTGCGGTCTCCGGTCTGGCGGGCTCAGCCTCCATTGTTGGGACACTACAGATTTAATCTCACCCCTTCAGCCGAAACGCTTGTATGGCAGCACCATCGTCCGGTTGACTGATCTAGCGGTTGGAGAAGCTCAGGTTTGTGCCAGGGAGGTGGACTCTGGTATCGTGAGATGCTGGAGAGGAAAAGACAGAAACGGACATGAGTTTCGTTCTCCCAAGGAGGACTTTCGGTTTCGTGGGGTCACTTCTGGAAGAGGATTTTCTTGTGGGATTCTGAAGGGACGAAATAGTGTTCAATGTTGGGGTCAAAGAGGAAATATTGAGGATGATATTCAGAGACAATTTGGGAATCTTTCAATGTCAAGCTTAGTTGGAGGAGATTCCCATGTTTGTGGTTTGACCATGAATGGAGTTTTGGTCTGTAAAGGAAACAACTCCTCTGGGCAATTGAATGTTCCTTTGAGTTCATCTTCAGAATTCTCTGGTGTTGCATTGGGATCCAACTTCACTTGTGCTATTAGAAGCAGGAATGGTCTGGTTATATGCTGGGGTGGAATTGATATGCTTGAGTTCGACAGTGACATGATCCAGAATGTTTCTTTCGAGTCAATTGTTGCTGGTTTGGACTATGTTTGTGGGTTAACGACAGGGAATTTGTCTGTGATCTGTTGGGGACATGGTTGGTCTGTGAGCCTTAACTCACACATCACAAATCTTCTTCCATTGGGAATGATAATCCCAGGTCCATGTGTTGAGGATTCTTGTAGCTCTTGTGGTACATATCCGAATTCCGAGGTTCTTTGTCATGGGTCTGGAAGCATATGCTATGCATGCCAGACAGAGCATCCACTCGCAGTGCCGTTACCCCGACTACCCCCACCATCACCATCATCATCATCATCCCCACCTGCTGGAAAAAGAAACACAAGAGAATTATATACATTTCTTATTCTTGGATCAGTTGGTGCTTTTGCAGGTCTCTGCTCAATTCTTTACTGCTTTTGGGTTGGAACATGGCGTTTATTGCAGAGAAAATCTGACAATTCAGTACAACTCGCAACCACTGAGGCCAATGTGGATGTTGCTTTTCCCACTGGTTCAACCACAGACATGACCATAAGATCAATCTCCAGCAAACGACAGAGTTCACGGACATTAAGGGGCCACAGAAGAAGTGGGTCCTCCTCAAAGCTCAGAGACAAGACAGAAAGCTTCACGTTATCAGAACTAGCAGCTGCCACAAACAACTTCTCAGTAGACAACAAAATAGGCTCCGGAAGCTTCGGCATTGTGTACAAAGGCAAGCTAGAAGACGGGCGTGAAGTAGCCATCAAAAGAGGAGAAACCAGCACGAAAAAGAAGAAATTCCAAGAAAAAGAAAGCGCATTCGATTCAGAACTCGCATTACTGTCTAGGCTTCATCACAAACACCTGGTGGGCCTAATCGGTTTCTGCGAGGAAAACGACGAGAGACTCCTCGTCTACGAATTCATGTCCAACAGATCACTCCACGACCACTTACACAGCACTCACAACACCGAAAGAGCCAGCAGTGTCATAAATTCATGGCGAATGAGGATCAAAATCGCATTAGACTCAGCCAGAGGGGTCGAATATCTTCACAACTACGCAGTGCCCTCCATAATTCACAGAGACATAAAGTCATCAAACATACTATTGGACTCAAACTGGAACGCCAAAGTCTCAGATTTCGGACTATCACTGATGGGTCCTGATTCAGAGCAAGAACCGATACCCGCAAAAGCAGTAGGAACAGTAGGGTATATAGACCCAGAGTACTATGTACTGAACGTTTTGACTGCAAAAAGCGATGTTTATGGATTAGGGGTGGTTATGCTGGAGCTTTTGACAGGTAAAAGAGCAGTCTTCAGAGATGATGATGGGGGGTCGAGTCCTGTAGGCGTGGTGGAGTATGCGGGTCCGAGGATTGGAGGAGGAGAGCTATGGAGTGTGCTGGATCACAGAGTAGGGGAGCCAGAGGTGAACGAAGGTGAGGCTTTGGAGATTATGGCGTACACTGCAATGCACTGCGTGAACTTGGAGGGGAAGGAGAGGCCCAGTGTGGGTGATATTGTGGCTAACCTGGAGAGGGCTTTGGCTTTCGTTGAAGGTAGTCCTGGTAGCTTCTCCATTACCGCAATCTCTTCCTCTGCTCCTTTCGAATGA 2445 0.4781 MTNPPSSLLPFSFVLIIFAIFFSLAFPTDVNGLGSASTTAITYGTGTVCGIVAGEFTQRIQCYQDGQTLQVLPNVSFQAISGGRSFFCGLRSGGLSLHCWDTTDLISPLQPKRLYGSTIVRLTDLAVGEAQVCAREVDSGIVRCWRGKDRNGHEFRSPKEDFRFRGVTSGRGFSCGILKGRNSVQCWGQRGNIEDDIQRQFGNLSMSSLVGGDSHVCGLTMNGVLVCKGNNSSGQLNVPLSSSSEFSGVALGSNFTCAIRSRNGLVICWGGIDMLEFDSDMIQNVSFESIVAGLDYVCGLTTGNLSVICWGHGWSVSLNSHITNLLPLGMIIPGPCVEDSCSSCGTYPNSEVLCHGSGSICYACQTEHPLAVPLPRLPPPSPSSSSSPPAGKRNTRELYTFLILGSVGAFAGLCSILYCFWVGTWRLLQRKSDNSVQLATTEANVDVAFPTGSTTDMTIRSISSKRQSSRTLRGHRRSGSSSKLRDKTESFTLSELAAATNNFSVDNKIGSGSFGIVYKGKLEDGREVAIKRGETSTKKKKFQEKESAFDSELALLSRLHHKHLVGLIGFCEENDERLLVYEFMSNRSLHDHLHSTHNTERASSVINSWRMRIKIALDSARGVEYLHNYAVPSIIHRDIKSSNILLDSNWNAKVSDFGLSLMGPDSEQEPIPAKAVGTVGYIDPEYYVLNVLTAKSDVYGLGVVMLELLTGKRAVFRDDDGGSSPVGVVEYAGPRIGGGELWSVLDHRVGEPEVNEGEALEIMAYTAMHCVNLEGKERPSVGDIVANLERALAFVEGSPGSFSITAISSSAPFE 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1848 814 SUPERFAMILY Protein kinase-like (PK-like) 480 788 IPR011009 -
Dere04g1848 814 MobiDBLite consensus disorder prediction 461 486 - -
Dere04g1848 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Dere04g1848 814 SMART serkin_6 503 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1848 814 Gene3D - 28 207 IPR009091 -
Dere04g1848 814 Gene3D Transferase(Phosphotransferase) domain 1 584 796 - -
Dere04g1848 814 ProSiteProfiles Protein kinase domain profile. 503 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1848 814 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Dere04g1848 814 CDD STKc_IRAK 509 790 - -
Dere04g1848 814 Pfam Protein kinase domain 504 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1848 814 Gene3D - 237 326 IPR009091 -
Dere04g1848 814 SUPERFAMILY RCC1/BLIP-II 68 322 IPR009091 -
Dere04g1848 814 FunFam serine/threonine-protein kinase-like protein CCR1 473 583 - -
Dere04g1848 814 Gene3D Phosphorylase Kinase; domain 1 462 583 - -
Dere04g1848 814 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 205 798 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1848 Dere-ChrDere04 21161579 21164023 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1848 6 803 Receptor kinase-like Gene Family AT3G55950 52.727 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dere04g1848 Pkinase 9.7e-45 CL0016