Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1832 ATGGAGGAAGACTTGGAGGAGAATAATAGATCAGAAGTGATGAGTAGTGGAAAGAACATGGATCAGATGGTTTCGTCTTCGATGGTGAGAAAGAAGTCAGAAGTGATAGTGGTGACAGAAAGGGTTCGGTTTCAAATGCTTAGGAGTTTGATGAGCAACCTGCGACAGGTGATCTTCGGGACGAAGCTTGCTGTGCTTTTTCCGGCGATCCCTTTGGCCGTTGCTGCTGATTTCTATGACGTCGGAAGGGCATGGATATTTGCATTGAGCTTACTTGGACTTGCCCCACTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTACACTGGCCCAACAGTTGGAGGGCTTCTGAATGCAACCTGTGGTAATGCAACTGAAATGATAATAGCTGTATTGGCACTTCACAAGAACAAAGTGAATGTTGTGAAGTTCTCTCTATTGGGTTCTATTCTCTCCAACCTTCTCTTGGTTCTTGGGACTTCACTTCTCTGTGGAGGCCTAGCCAACCTTAAGAAAGAACAAAGATATGACAGAAAACAGGCAGATGTAAACTCACTACTTTTGCTTTTGGGATTGCTGTGCCATTTGCTGCCCTTGATCTTCAAGTATGCCCTGGCAGGGGGCTATTACCCTATAGCCACTTGTACTCTTCAATTGTCAAGAGCAAGCAGTATTGTTATGCTTCTAGCATATGTTGCATATATCTTCTTCCAACTGAAAACTCACAGACAGTTGTTTGATTCACAGGAGGGAGATGAAGATGAAGAGAAGGCTGTGATAGGATTTTGGAGTGCATTTACTTGGTTGGTGGGCATGACACTCGTCATATCTTTGCTTTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCGGATTCTTGGGGCATTTCTGTAAGCTTTATTAGCATAATTTTGCTACCAATTGTGGGGAATGCTGCAGAACATGCTGGTTCAGTCATATTTGCTTTTAAGAACAAGTTGGATATATCCCTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGGTTGTTGCATGGATAATGGGTATAAAAATGGATCTAGATTTCGATCTCCTTGAAACTGGGTGTCTTGCTTTTACAATAATAGTTACAGCTTTCACTTTGCAGGATGGAACCTCACACTACATGAAAGGAGTGGTACTTTCCCTGTGTTACATTGTCATTGCTGCATGCTTTTTTGTTCACAAAGCTCCACTCATCAATCAAATTCCAGGGGACAAAGTGAGAGCTCAGTGA 1290 0.4279 MEEDLEENNRSEVMSSGKNMDQMVSSSMVRKKSEVIVVTERVRFQMLRSLMSNLRQVIFGTKLAVLFPAIPLAVAADFYDVGRAWIFALSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIAVLALHKNKVNVVKFSLLGSILSNLLLVLGTSLLCGGLANLKKEQRYDRKQADVNSLLLLLGLLCHLLPLIFKYALAGGYYPIATCTLQLSRASSIVMLLAYVAYIFFQLKTHRQLFDSQEGDEDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSVIFAFKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIKMDLDFDLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLSLCYIVIAACFFVHKAPLINQIPGDKVRAQ 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1832 429 Pfam Sodium/calcium exchanger protein 268 409 IPR004837 GO:0016020|GO:0055085
Dere04g1832 429 Pfam Sodium/calcium exchanger protein 84 242 IPR004837 GO:0016020|GO:0055085
Dere04g1832 429 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 21 416 IPR004713 GO:0006812|GO:0008324|GO:0016020
Dere04g1832 429 FunFam Vacuolar cation/proton exchanger 258 412 - -
Dere04g1832 429 NCBIfam calcium/proton exchanger 68 411 IPR004798 GO:0006816|GO:0015369
Dere04g1832 429 Gene3D - 114 262 IPR044880 -
Dere04g1832 429 Gene3D - 263 412 IPR044880 -
Dere04g1832 429 FunFam Vacuolar cation/proton exchanger 114 257 - -
Dere04g1832 429 NCBIfam calcium/proton exchanger 49 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1832 Dere-ChrDere04 20968489 20973679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1832 7 416 Antiporters AT2G38170 66.118 0.0 535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1832 04 20968489 20973679 Dere04g1832 04 20968489 20973679 ECH