Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere04g1828 | ATGGGAAAGATAGCGTTTTATGAATCTCTCAAAGCTCTGGAGGCTGATATTCACCATGCCAATACCCTGCTATTAGGATATCCCAGGGATAAAGATGAAGCATGCTTTCAGATGAGACTATCCTACAGTCCAGCAGCCACCTATTTTCTTTTTCTTGTTCAGTGGACGGATTACCACCTGGCTGGTGCTCTGGGTTTGCTGAGAGTTCTAATCTATATGACCTATGGAGATGGGAAGAACACCATGTCAATATATGAAAGGAAAGCGAGCATTAAAGAATTTAAATCGGTGATCTTTCCTGCTTTATTGCAACTTCAGAATGGCATCACAGCTTTGGAGGAAAGAAAACAGAAAGAAGTATATGCTGCTAGATATAAAAGGAAGGAAAAACAATCTAATATTGACATGGAAAGAGAGGAGGAATGTGGAATTTGCATGGAGGTGAAGCCAAAAGTTGTGCTGCCTAATTGCTGCCATTGTATGTGTTTGAAGTGCTTCAGAGATTGGCGTGTGAGATCCGCGTCTTGCCCCTTTTGCCGGGATAATCTAAGGAGGGTCAACTCGGGTGACCTTTGGAATTACACAGATGATAGTGAAATTGTCGATTCTGAGATGATTTTCAAAGAAAATCGTAAGAGGCTGCTTTTGTACATAGAGAAGTTGCCTATTGTTGATCCAGACCTCAGCTATATGGCCTATGAACCGTGTGGGTGGTGA | 717 | 0.4212 | MGKIAFYESLKALEADIHHANTLLLGYPRDKDEACFQMRLSYSPAATYFLFLVQWTDYHLAGALGLLRVLIYMTYGDGKNTMSIYERKASIKEFKSVIFPALLQLQNGITALEERKQKEVYAARYKRKEKQSNIDMEREEECGICMEVKPKVVLPNCCHCMCLKCFRDWRVRSASCPFCRDNLRRVNSGDLWNYTDDSEIVDSEMIFKENRKRLLLYIEKLPIVDPDLSYMAYEPCGW | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere04g1828 | 238 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 109 | 190 | IPR013083 | - | |
Dere04g1828 | 238 | PANTHER | RING FINGER PROTEIN 41, 151 | 6 | 229 | - | - | |
Dere04g1828 | 238 | FunFam | RING/U-box superfamily protein | 123 | 189 | - | - | |
Dere04g1828 | 238 | Pfam | Zinc finger, C3HC4 type (RING finger) | 139 | 185 | - | - | |
Dere04g1828 | 238 | ProSiteProfiles | Zinc finger RING-type profile. | 142 | 180 | IPR001841 | - | |
Dere04g1828 | 238 | SUPERFAMILY | RING/U-box | 131 | 184 | - | - | |
Dere04g1828 | 238 | SMART | ring_2 | 142 | 179 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere04g1828 | Dere-ChrDere04 | 20871643 | 20874897 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere04g1828 | 104 | 198 | C3H Transcription Factor Family | AT5G01960 | 30.526 | 2.95e-07 | 48.9 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere04g1828 | 04 | 20871643 | 20874897 | Dere04g1828 | 04 | 20871643 | 20874897 | ECH |