Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1827 ATGGTCATGGAGGCTTCATGGGAGGAAAGCGTCACAAACTCCATCAACACAATCTACCTCCTCTTCTCCGCCTACCTCGTCTTCGTCATGCAGATTGGCTTCGCCATGCTGTGTGCAGGCTCTGTTAGAGCCAAGAACGCCATGAACATTATGCTTACCAACGTCGTCGACGCCGTCGTCGGAAGCATCTCCTTCTACCTCTTCGGCTTCGCATTTGCCTTCGGCGACGGCTCACATTCCAACCCTTTCATCGGTACTGATCTCTTCGCTCTCGTTAATATTCCAGACGCTAAGTACGATTACAGCTTTTTTCTCTATCAATGGGCTTTTGCTATAGCCGTAGCAGGCATCACCAGTGGGTCCATAGCCGAGAGAACCCAGTTCAGTGCTTATCTTGTTTTCAGCTTTTTTCTCAGCGGTTTTGTGTATCCAGTTGTGGCCCACTGGGTCTGGTCGTCCAACGGTTGGCTCAGCCCCGGTTCGAGCCAGCCGTTTCTGGGTTCGGGTGCGATTGACTTTGCTGGGAGTGGAGTAGTGCATATGGTTGGTGCAATTGCTGGGCTTTGGGGGTCTCTCATAGAAGGCCCACGGGTAGGCCGGTTCGATGCATTTGGCAAACCGGTGCCGCTTCGAGGCCACAATGCGAGCCTAGTGGTACTCGGAACGTTTCTCTTGTGGTTCGGATGGTTCGGGTTTAACCCCGGTTCATTTGATAAAATTGTTGTGTCTTATCCTGACACATCTGATCAAGGTAATTGGACTTCCATCGGTCGAACCGCCGTTGTGACTACATTAGCCGGTTCGACCGCTGGGGTAATAACCTTATTCGGGCGGCGATTATTGATCGGACATTGGGATGCAATCGATGTCTGCAATGGCTTACTTGGTGGGTTTGTAGCCATCACCTCAGGGTGCGCGGTGGTTGAGCCGTGGGCTGCGATTATATGTGGCTTTGTCTCGGCTTGGGTCTTGATTGGGCTCAATATCTTGGCTCTGAGACTGAACTATGACGACCCATTAGAGGCGGCCCAATTACATGGAGGGTGTGGGGCTTGGGGTTTGATATTCACAGGGTTGTTTGCCAAGGAGGAGTTTGTGATTCAAGCCTATGATTCAGGTGTGACAGGGGTGGCCAGGCCTTATGGGCTTTTATTAGGAGGAGGATGGGGCTTAATTGGAGCCCAAGTTATTGAATTGCTGGTTATATTGGGCTGGGTTAGTATCACAATGGGCCCACTGTTCTATGCCTTACACAAGCTTAAGCTACTGAGGATCTCCAGAGATGATGAAGTTACAGGCCTTGATATCTCAAGCCATGGAGGGTATGCTTATGCTTCTCACGAGGATAATTATACTCAATCTTATGCAGATTATGTGAGCATCAGACAGGATCGCTCATAA 1401 0.5032 MVMEASWEESVTNSINTIYLLFSAYLVFVMQIGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAFGDGSHSNPFIGTDLFALVNIPDAKYDYSFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLSGFVYPVVAHWVWSSNGWLSPGSSQPFLGSGAIDFAGSGVVHMVGAIAGLWGSLIEGPRVGRFDAFGKPVPLRGHNASLVVLGTFLLWFGWFGFNPGSFDKIVVSYPDTSDQGNWTSIGRTAVVTTLAGSTAGVITLFGRRLLIGHWDAIDVCNGLLGGFVAITSGCAVVEPWAAIICGFVSAWVLIGLNILALRLNYDDPLEAAQLHGGCGAWGLIFTGLFAKEEFVIQAYDSGVTGVARPYGLLLGGGWGLIGAQVIELLVILGWVSITMGPLFYALHKLKLLRISRDDEVTGLDISSHGGYAYASHEDNYTQSYADYVSIRQDRS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1827 466 NCBIfam ammonium transporter 16 444 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere04g1827 466 ProSitePatterns Ammonium transporters signature. 172 197 IPR018047 GO:0008519|GO:0016020|GO:0072488
Dere04g1827 466 PANTHER AMMONIUM TRANSPORTER 12 440 - -
Dere04g1827 466 FunFam Ammonium transporter 2 458 - -
Dere04g1827 466 SUPERFAMILY Ammonium transporter 12 425 - -
Dere04g1827 466 Gene3D Ammonium transporter AmtB like domains 2 462 IPR029020 -
Dere04g1827 466 Pfam Ammonium Transporter Family 20 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1827 Dere-ChrDere04 20869271 20870671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1827 9 450 Inorganic Solute Cotransporters AT1G64780 66.964 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1827 04 20869271 20870671 Dere04g1827 04 20869271 20870671 ECH