Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1824 ATGCCAACCATCGCCGGACGAAAGTTCGCCAGCGAAGCGCTCTCGGAGACAACGTCCGTCGTGCCGGAGGCGACCGCTTCCGATGCTCGATCTGACGTCAACTCCACTCCTCATAAACGGAGATTGAGATCCGATGGGCCGCCGACCATGGGCAGTCCGATCCCTTCGCCGGCGAAATGGAAATCGCCCCGTCGATTTAGCAGTGCGAGCCCAAATCGTGCTGTAACTGGGAATGAGATAGGTACTAACGAAGAAGAAGCCAAATCGCAAAAATTGACGATGAAGTCTTCGCAGGATGGTTTTACAGTGAAGCCGAAATGGAATCCGAAAGATGGCGAGCAAATAAGGACGGTGAAGGAGGCATTGCATGTGTCCACAGCTCCGTCTACCATTGTGTGCCGTGAAGATGAGCAAAATTTGGTTTTCGAGTTCTGCAAGTCATGCATTGAGCATGAGAAGGCTGGGAGTCTGTACATATGTGGGTGTCCTGGTACTGGAAAATCGTTATCCATGGAGAAAGTAAATGAGCTTTTAGCCAATTGGGCTAGACAGGCAGGTTTCTTGCAGCCCGATATCTTATCTGTGAACTGTACTTCCCTTGCTAATACATCTGACATTTTCAGCAAGATACTTGGGTTCAACCAACCGCGAGGAAAAAAAATTTCACCTACACCTTTACAACAACTTCAGAACATGTACTCTCAGAAGTCGTCTAGCAAGAACATGATATTGATAGTAGCTGATGAATTAGATTATCTAATTACCAAAGACAGGGCTGTGCTTCACGATCTTTTCATGCTCACCACTTTCCCATTTTCTAGATGTATATTAATAGGGGTGGCAAATGCAATTGACCTCGCTGATCGTTTTCTTCCAAGGTTAAAATCATTAAACTGCAAGCCCATCATTGTAACTTTTCGGGCCTACTCTAAAGACCAGATCCTAAGGATTCTTCAAGAAAGGCTAAGTGAACTTCCTTACACTGTCTTCCAACATCAAGCACTAGAGCTCTGTGCTAGGAAAGTTGCTGCCGCTTCCGGAGACATGCGGAAGGCTCTTTGTATTTGCCGGAGCGCAATAGAGATGCTGGAGGCAGAAATTAGAGAATCTACTGGCGTTTTAGACATTTCAACGGAAGAGAAAGCATCGCCTGAACAAATGATGGCTTCTTCTCTTTATCACAATAAAAAACAAGAATTTGATGTTGTAAGAATTGATCATATGGCTCTTGCCTTGTCCAAGACGTATAGATCGCCTGTGGTGGATACAATACAATCTCTACCACACCATCAACAGATTATTCTTTGCTCTTCCATGAAACATTTCCGTGGAGCTAAGAAGGATACAATCCTTGGCGAGTTGTATAAATCTTACATGGCCATATGCAAATCATCACTAATTCCGCCAGCTGGAATTTTGGAGTTTTCAAATATGTGCAGAGTATTGAATGACCAGGGGCTTATTAAACTAGGACCATCGCGAGAGGACAAATTGAAAAGGGTGACACTGAAAATAGATGAAGCTGATATTACCTTTGCATTGCAGGTAGTCTTCAGAAGTTCAAGCTCCTCTATATACCATTTGAGTTTTCCCTTATTCAACTTACTAGCTATATTGATTGCTCATCATGAAAGTAATTCTTTGACGTTGTTTAATTCCATGACACAGGGAATCCGTTTTTTTCGAAACTGTCTTCAATGA 1701 0.4362 MPTIAGRKFASEALSETTSVVPEATASDARSDVNSTPHKRRLRSDGPPTMGSPIPSPAKWKSPRRFSSASPNRAVTGNEIGTNEEEAKSQKLTMKSSQDGFTVKPKWNPKDGEQIRTVKEALHVSTAPSTIVCREDEQNLVFEFCKSCIEHEKAGSLYICGCPGTGKSLSMEKVNELLANWARQAGFLQPDILSVNCTSLANTSDIFSKILGFNQPRGKKISPTPLQQLQNMYSQKSSSKNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLKSLNCKPIIVTFRAYSKDQILRILQERLSELPYTVFQHQALELCARKVAAASGDMRKALCICRSAIEMLEAEIRESTGVLDISTEEKASPEQMMASSLYHNKKQEFDVVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGAKKDTILGELYKSYMAICKSSLIPPAGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTLKIDEADITFALQVVFRSSSSSIYHLSFPLFNLLAILIAHHESNSLTLFNSMTQGIRFFRNCLQ 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1824 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 369 IPR027417 -
Dere04g1824 566 MobiDBLite consensus disorder prediction 63 83 - -
Dere04g1824 566 Gene3D - 299 423 - -
Dere04g1824 566 MobiDBLite consensus disorder prediction 12 32 - -
Dere04g1824 566 FunFam Cell division control protein 298 424 - -
Dere04g1824 566 FunFam Cell division control protein 112 297 - -
Dere04g1824 566 CDD Cdc6_C 428 510 IPR015163 -
Dere04g1824 566 PIRSF Cdc6 6 566 IPR016314 GO:0006270|GO:0051301
Dere04g1824 566 MobiDBLite consensus disorder prediction 1 110 - -
Dere04g1824 566 Pfam AAA lid domain 331 366 IPR041083 -
Dere04g1824 566 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 47 515 - -
Dere04g1824 566 Pfam CDC6, C terminal winged helix domain 435 513 IPR015163 -
Dere04g1824 566 CDD AAA 137 298 - -
Dere04g1824 566 SMART Cdc6_C_2 435 514 IPR015163 -
Dere04g1824 566 Gene3D - 424 516 IPR036388 -
Dere04g1824 566 FunFam Cell division control protein 427 517 - -
Dere04g1824 566 Pfam AAA domain 152 269 IPR003593 GO:0016887
Dere04g1824 566 Gene3D - 111 298 IPR027417 -
Dere04g1824 566 SUPERFAMILY "Winged helix" DNA-binding domain 420 516 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1824 Dere-ChrDere04 20844868 20851621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1824 1 520 Core DNA Replication Machinery Family AT2G29680 58.396 0.0 586