Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1817 ATGGAGACTCTTCCTCTTCTCTTCACTCTCGCTGCTGCTCTCTCTGCCTATTTTCTGTGGTTCTATTTTCTGTTAGCTAGCAACCTGACGGGTCCCAATGTGTGGCCCTTCGTCGGAAGCCTCCCTCTTCTCGTAAAGAACCGGAGACGGTTCCACGACTGGATCGCCGGAAACCTCCGGGCCACCGGGGCCTCAGCCACGTACCAGACTTGCATTATCCCCTTCCCTTTCTTGGCTCGCAAGCAAGGGTTCTACACAGTGACGTGCCACCCTAAGAATATTGAGCATATCCTCCGAACCCGGTTCACGAACTACCCCAAAGGACCCAAATGGCAAATCGCTTTCCATGATCTTCTGGGTCAAGGTATATTCAACAGCGACGGAGATACATGGCTCATGCAACGTAAAACCGCAGCGCTAGAGTTCACGACCCGAACCTTAAGGCAAGCTATGGCTCGCTGGGTGAACCGGACCATCAAGAACCGGTTATGGTGTATTCTGGACAAGGCCGCGAAGGAGAATGTGTCAGTGGACTTACAAGATCTTCTGCTTCGCTTAACCTTCGATAACATTTGCGGATTAACCTTTGGCAAAGACCCGGAAACTCTCTCTCCGGATCTACCCGAAAACCCGTTCGCCATGGCTTTCGATACCGCCACCGAGGCCACCATGCACAGACTCCTGTACCCGGGTCTCCTGTGGAGGTTCCAGAAGCTTCTAGGTATCGGAGATGAGAGGAGACTGAAAGAGAGCTTAAAAGTCGTGGAGAATTACATGAACGACGCCGTTTTGGCTCGCAAGAAAGCTCCGTCCGACGATCTGCTCTCCCGGTTCTTAAAGAAGCTCGACGCCGATGGGAACCCCATTCCAGAAGACGTACTCCAGCGAATTGCTCTGAATTTCGTTCTCGCCGGAAGGGACACGTCCTCGGTGGCTCTCAGCTGGTTCTTCTGGCTCGTCATGAACCACCCTCACGTCGAGGACAAGATCGTCAACGAGATAACGTCGGTGCTCCGCCAGACTCGCGGCGGCGATTGGCGGAGATGGACGGAGGATGCTCTGGACTTCGACGAAGCGGATCGGTTGGTTTATCTGAAGGCCGCTTTGGCCGAGACACTGCGGTTGTACCCGTCGGTGCCACAGGACTTCAAGTACGCCGTCGCCGACGACGTCTTGCCTGACGGGACATTCGTACCTGCGGGATCGACGGTGACGTATTCTATATACTCAGTGGGGAGGATGAAGACAATCTGGGGGGAGGATTGCTTGGAGTTTAAACCGGAGAGATGGCTGTCGGTTCAGGGAGACCGGTTCGAACCGCCCAAGGATGTGTTCAAGTTCGTGGCCTTCAACGCCGGACCGAGAACCTGTTTGGGGAAGGACTTGGCCTACCTACAAATGAAGTCTGTGGCAGCGGCCGTACTGTTGCGTTACCGGCTATCACAGGTTCCCGGTCACCGGGTGGAGCAGAAGATGTCGCTCACTCTGTTCATGAAGAATGGGCTCCACGTGTCATTGCATTCACGTAAGCTCCAAGGAGGGGCTTAG 1548 0.5459 METLPLLFTLAAALSAYFLWFYFLLASNLTGPNVWPFVGSLPLLVKNRRRFHDWIAGNLRATGASATYQTCIIPFPFLARKQGFYTVTCHPKNIEHILRTRFTNYPKGPKWQIAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKENVSVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPENPFAMAFDTATEATMHRLLYPGLLWRFQKLLGIGDERRLKESLKVVENYMNDAVLARKKAPSDDLLSRFLKKLDADGNPIPEDVLQRIALNFVLAGRDTSSVALSWFFWLVMNHPHVEDKIVNEITSVLRQTRGGDWRRWTEDALDFDEADRLVYLKAALAETLRLYPSVPQDFKYAVADDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLSVQGDRFEPPKDVFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSQVPGHRVEQKMSLTLFMKNGLHVSLHSRKLQGGA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1817 515 Gene3D Cytochrome P450 25 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 CDD CYP86A 69 502 - -
Dere04g1817 515 FunFam Cytochrome P450 24 512 - -
Dere04g1817 515 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 PANTHER CYTOCHROME P450 24 504 - -
Dere04g1817 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Dere04g1817 515 Pfam Cytochrome P450 85 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere04g1817 515 SUPERFAMILY Cytochrome P450 21 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1817 Dere-ChrDere04 20769592 20771914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1817 1 509 Cytochrome P450 AT5G58860 78.082 0.0 817