Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1791 ATGCCAGAAAGTCGAGTTCCTTCTTTCTGTGTGGTGATGGCTCAGCTGGCAGGTTCAGATGAGATAGAGTCTCTGAGAATTGAATTAGTGGAGCTTGGAAGGAGTATAAGGTCCTCATTTGGCAGCCGTCCCTCGAGTTTCCAAAATACAGTACAAGATGCTGAAGATGATGATGAGAGAGATTTGTTGCAATGGGCTGCAATACAAAGGTTGCCCACTTTTGAGAGGATTACTTCAGCTTTGTTTGATGTACACGAAGGTATGGACGAAAATGGAGAAGTTAAAGGGAAACAGGTGGTTAATGTCAGCAGGCTTGGAGCTCATGAACGGCATATGTTCATAGAAAGGCTTATCAAACGCATCGAAAATGACAACCTTCGATTGTTGCACAAACTGAGGAAAAGAATTGACAAAGTTGGTATTAAGTTGCCGACTGTGGAAGTGAGATATCAAAATCTTTGTGTGGAAGCGGAGTGTCGAGTAGTTCATGGCAAGCCTGTACCTACTCTGTGGAACGCCCTCAGAGACACGATCTTTGATATCACCAAATTATCAACTCTGAAATCTCAGAAATCGAAGATGAGTATCATCAGTGATGCACATGGTATTATTAAGCCAGGAAGAATGACCTTATTGCTTGGCCCTCCTGCGAGTGGCAAAACCACATTACTCATGGCCCTGGCAGGAAAGCTCAGCCATTCTCTGAAGGTTGATGGGGACATTTCTTACAATGGACACATGCTGGAAGAATTCATTCCTCAGAAATCTTCAGCATATGTAAGCCAATATGATTTGCATATCGCGGAGATGACTGTGAGGGAAACACTTGACTTTTCTGCACGTTGTCAGGGTGTAGGATGTCGCTCTGAAATTCTGCTGGAAGTCAGTAGAAGGGAGAAAGAGGCAGGGATAGTGCCAGACCCTGATTTAGATGCATATATGAAGGCAACATCAGTTAAAGGACTGAAGAGTAACCTTCAGACAGACTACATTTTAAAGATCCTTGGTCTTGATGTCTGCGCTGATACATTGGTTGGAGATCCCGCCAGAAGAGGCATATCTGGGGGTCAAAAGAAAAGGTTAACTACAGGGGAGATTATCGTTGGACCAATTAGAGCTCTATTTATGGATGAAATATCCAATGGTTTAGACAGCTCTACCACTTTCCAGATCGTCTCTTGCCTTCAGCATTTGGTGCATATCACAGATGCCACAGCATTAATTTCACTCCTCCAGCCGGCACCAGAGACCTTTAATCTCTTTGATGACATTGTCCTAATGGCGGAAGGGAAAATTGTGTACCATGGCCCACGTGATTATATTCTTAAGTTTTTTGAGGACTGTGGGTTCAAGTGCCCAGAAAGAAAAGGAACTGCTGACTTTCTTCAGGAAGTTATCTCCAGGAAAGACCAAGCACAGTATTGGTTCAACACAGAAAAACATTACAGCTATGTTTCTGTTGATCAATTCATTAGGAAATTTAAGGATTGTACTATTGGTCAAAAGTTGAAGGAGGAGCTCTCAAAGCCATTTGATAAGTCTCACAGCCATAAGAATGCTCTCTCATTCAGAAAATATTCCTTAACAAATTGGGAACTGTTAAAAGCTTGTACAATGCGGGAATTTCTTTTAATGAAAAGGAACTCTTTTGTTTATGTTTTCAAGTCAACACAGCTTGTCATCATTGTATCTATAGCGATGACTGTTTTTATTCGAACTCGAATGGCCGTTGATCTGATCCATGCAAATTATTTTATGGGTTCACTGTTCTATTCACTCATTATACTTCTTGTTGATGGATATCCGGAACTGGCAATGACTGTGTCAAGACTTTCAATTTTTTACAAACAAGAAGACTTGTGCTTTTATCCTGCTTGGGCTTATGCAATCCCATCTGCTGTTCTAAAAATTCCACTTTCATGCATGGAATCTTTCATCTGGACAGCACTTTCTTATTATGTCATTGGTTACAGCCCTGAAGTAGGCAGGTTCTTCCGCCAGTTCCTCCTCCTATTTGCCGTACATCTAACATCGATATCCATGTTTCGATTCATTGCCTCAGTTTTCCAAACAGTGGTTGCTTCAATGACAGCTGGTACTATGTGCATACAAGTTGTTCTACTATTCGGTGGCTTCATTATTCCAAAACCATATATGCCATCTTGGTTGCAATGGGGATTTTGGGTTTCTCCTTTGACATACGCAGAGATAGGATTGACTGTAAATGAATTCCTTGCTCCACGGTGGGGAAAGATGTCTGGAAACACAACTTTGGGGCAACAAACACTTGAAAGCCGTGGCCTCAATTTTGATGGTCGCTTTTATTGGATATCAATTGGTGCCTTAATTGGGTTCACAGTTCTATTTAACGTGGGTTATACCTTGGCATTGACATTCTTCAAGTCTCCTGGAAGGTCAGGCACTCTTGTATCTGACAAGGAGCTATCTGTATTACAAGGAAAGGAAGAGAGCAGTGGTAACATTGGTGGAGACAAGAAAGCTATCGGTTCTTCAGTTGAAATTGCTGCAGAACCTGGAAAAAGAGGATTGGTTCTACCATTCCAGCCGCTGACAGTATCATTTTGTGATGTTCAGTACTATGTTGATACCCCTTCGGAAATGAGAAAGAGGGGTTTTGCACAGAAAAAGCTCCAGCTTATTTCTGACATTACTGGTACATTCAGACCGGGAATTTTGACAGCATTGATGGGGGTCAGTGGAGCAGGGAAAACAACTCTAATGGATGTTCTTTGTGGAAGGAAAACTGGTGGTATTGTAGAAGGAGATATTAGAATTGGCGGCTATCCAAAGGTTCAAGAAACATTTGCCAGGGTATCAGGTTATTGTGAACAAACAGACATACATTCTCCGCATATTACTGTAAAAGAATCTGTGATGTTTTCTGCTTGGTTGCGCCTTCCTTCTCAGATTGATGCGAAGACTAGAGCTGAATTTGTGAATGAAGTCCTTCAAACTATTGAGCTTGATGAGATCAAGGATTCCTTAGTAGGCATGCCAGGTGTCAGTGGATTGTCAACTGAGCAAAGAAAACGGCTGACCATAGCCGTTGAGCTTGTTGCTAACCCTTCAATCATATTTATGGATGAACCAACTTCAGGTTTAGATGCAAGGGCAGCTGCAGTTGTTATGAGAGCAGTAAAGAATGTTGTTGGAACAGGAAGGACTGTTGTGTGCACCATTCATCAGCCAAGTATCAACATATTTGAGGCATTTGATGAGTTGATTCTCATGAAAGCTGGAGGACGCATGATCTACTCTGGTCCACTTGGAAAGAACTCGACTAGGGTCATTGAATACTTTGAGAGTATACCAGGAGTGGCAAAGATAAGAGACAATTATAATCCAGCAACATGGATGCTAGAAGTAACTTCCAAGTCTGTAGAAACTGAACTTGGAGTAGATTTTGCCCAAATTTACAGAGAGTCTACCTTATATGAGCAGAACAAAGAGTTAGTTAAGCAATTAAGTACACCCTCTCCTGGTTCAAAAGATTTGCATTTCCAGTCCCATTTTCCACAAAATGGTTGGGAACAGTTTAAGGCATGCTTGTGGAAACAGCATTTGTCCTATTGGAGAAGTCCTTCATACAACTTGATGCGCATCTTTTATGTGACTGCCTTTTCTCTTCTGTTTGGGATACTGTTCTGGAAGCAAGGAAAGAAAATAAATAGCCAACAGGACCTGTTCAATATATTTGGTTCAATGTTTACTGCAACCCTCTTCTTTGGAATAAATAACTGCTCTACAGTTCTACCATATGTGGCAACAGAGCGCTCTGTTTTGTACCGTGAAAGATTTGCTGGAATGTACTCCCCTTGGGCCTATTCATTTGCACAGGTGCTTGTAGAGGTTCCTTACTCATTCACTCAAGCTGCCCTGTATATGATCATCACATATCCTATGGTGGGCTACTATGTGTCCTTCTATAAAATATTTTGGTCATTCTACAGCATGTTCTGCTCCATGCTTTACTTTAATTACCTGGGGATGCTGCTTGTTTCACTGACACCAAATGTTCAACTGGCTTCTATTGTGGCTTCATCTGCCTTCACAATGCTGAATTTATTTTCTGGGTACATTGTGCCAAAACCTCATATTCCGAAGTGGTGGATCTGGTTGTTCTATTTATGCCCAGTGTCTTGGACACTTGAAGGAATGCTCACTTCACAATATGGAGATTTGGACAATGAGATATCAGCTTTTGGAGAAACTAGAACAGTTGCTGCATTCTTAGAAGATTATTTCGGGTTTCACCATGACCTTCTAGGTGTAACTGGTGTAGTTCTGATTGTCTTCCCCATTGTTTTTGCTGTTATTTTTGCTTACTGCATTGGAAATCTGAACTTCCAGAGGAGGTAA 4380 0.4148 MPESRVPSFCVVMAQLAGSDEIESLRIELVELGRSIRSSFGSRPSSFQNTVQDAEDDDERDLLQWAAIQRLPTFERITSALFDVHEGMDENGEVKGKQVVNVSRLGAHERHMFIERLIKRIENDNLRLLHKLRKRIDKVGIKLPTVEVRYQNLCVEAECRVVHGKPVPTLWNALRDTIFDITKLSTLKSQKSKMSIISDAHGIIKPGRMTLLLGPPASGKTTLLMALAGKLSHSLKVDGDISYNGHMLEEFIPQKSSAYVSQYDLHIAEMTVRETLDFSARCQGVGCRSEILLEVSRREKEAGIVPDPDLDAYMKATSVKGLKSNLQTDYILKILGLDVCADTLVGDPARRGISGGQKKRLTTGEIIVGPIRALFMDEISNGLDSSTTFQIVSCLQHLVHITDATALISLLQPAPETFNLFDDIVLMAEGKIVYHGPRDYILKFFEDCGFKCPERKGTADFLQEVISRKDQAQYWFNTEKHYSYVSVDQFIRKFKDCTIGQKLKEELSKPFDKSHSHKNALSFRKYSLTNWELLKACTMREFLLMKRNSFVYVFKSTQLVIIVSIAMTVFIRTRMAVDLIHANYFMGSLFYSLIILLVDGYPELAMTVSRLSIFYKQEDLCFYPAWAYAIPSAVLKIPLSCMESFIWTALSYYVIGYSPEVGRFFRQFLLLFAVHLTSISMFRFIASVFQTVVASMTAGTMCIQVVLLFGGFIIPKPYMPSWLQWGFWVSPLTYAEIGLTVNEFLAPRWGKMSGNTTLGQQTLESRGLNFDGRFYWISIGALIGFTVLFNVGYTLALTFFKSPGRSGTLVSDKELSVLQGKEESSGNIGGDKKAIGSSVEIAAEPGKRGLVLPFQPLTVSFCDVQYYVDTPSEMRKRGFAQKKLQLISDITGTFRPGILTALMGVSGAGKTTLMDVLCGRKTGGIVEGDIRIGGYPKVQETFARVSGYCEQTDIHSPHITVKESVMFSAWLRLPSQIDAKTRAEFVNEVLQTIELDEIKDSLVGMPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRAVKNVVGTGRTVVCTIHQPSINIFEAFDELILMKAGGRMIYSGPLGKNSTRVIEYFESIPGVAKIRDNYNPATWMLEVTSKSVETELGVDFAQIYRESTLYEQNKELVKQLSTPSPGSKDLHFQSHFPQNGWEQFKACLWKQHLSYWRSPSYNLMRIFYVTAFSLLFGILFWKQGKKINSQQDLFNIFGSMFTATLFFGINNCSTVLPYVATERSVLYRERFAGMYSPWAYSFAQVLVEVPYSFTQAALYMIITYPMVGYYVSFYKIFWSFYSMFCSMLYFNYLGMLLVSLTPNVQLASIVASSAFTMLNLFSGYIVPKPHIPKWWIWLFYLCPVSWTLEGMLTSQYGDLDNEISAFGETRTVAAFLEDYFGFHHDLLGVTGVVLIVFPIVFAVIFAYCIGNLNFQRR 1459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1791 1459 Gene3D - 182 494 IPR027417 -
Dere04g1791 1459 CDD ABCG_PDR_domain2 856 1094 IPR034003 -
Dere04g1791 1459 FunFam ABC transporter G family member 34 184 488 - -
Dere04g1791 1459 Pfam ABC-2 type transporter 412 466 IPR043926 GO:0140359
Dere04g1791 1459 Pfam ABC-2 type transporter 1068 1137 IPR043926 GO:0140359
Dere04g1791 1459 FunFam ABC transporter G family member 34 873 1105 - -
Dere04g1791 1459 Pfam ABC transporter 888 1039 IPR003439 GO:0005524
Dere04g1791 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 453 IPR027417 -
Dere04g1791 1459 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 45 1459 - -
Dere04g1791 1459 Pfam ABC-2 type transporter 1184 1397 IPR013525 GO:0016020|GO:0140359
Dere04g1791 1459 Pfam ABC-2 type transporter 533 744 IPR013525 GO:0016020|GO:0140359
Dere04g1791 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 182 454 IPR003439 GO:0005524
Dere04g1791 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 859 1111 IPR003439 GO:0005524
Dere04g1791 1459 Pfam ABC-transporter N-terminal 123 173 IPR029481 -
Dere04g1791 1459 SMART AAA_5 206 431 IPR003593 GO:0016887
Dere04g1791 1459 SMART AAA_5 896 1088 IPR003593 GO:0016887
Dere04g1791 1459 Gene3D - 873 1106 IPR027417 -
Dere04g1791 1459 Pfam ABC transporter 203 380 IPR003439 GO:0005524
Dere04g1791 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 879 1097 IPR027417 -
Dere04g1791 1459 CDD ABCG_PDR_domain1 185 436 IPR034001 -
Dere04g1791 1459 Pfam Plant PDR ABC transporter associated 753 809 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1791 Dere-ChrDere04 20518444 20530567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1791 976 1071 Calmodulin-binding Proteins AT2G36910 32.292 7.82e-06 48.9