Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1790 ATGGAGTTAACACCAAGAGGAAGAAACCAGCACTCTCCTTTGAGTTTGAGCTTTGACAGAGATGCAGATTCTGTTTTGGAGCAAGATAGGGAGATTCTGTCGAAGTGGGCTGCCATTGAAAAACTACCCACTTTCAAAAGGATTAGAACTTCGTTTGTTGACGTGATTGATGATGACAATGGAAGAAGCGGCAGCAGCAGCAGCTGCAATTTAAGATCAGAAAGTAGAAGAAACTTAAGATCAGATAGTAAAAGGGTCGTTGATGTTACTAAACTTGCAGCAGTTGAAAGGCGTTTGTTGATTGACAAGCTCATAAAGCACATTGAGAATGACAATCTTCAGTTGCTGCTGAAACTAAGAGAAAGGATGGAGAGAGTGAATGTGAAGATGCCTACTGTGGAGGTCAGGTACAAGAACTTGCATGTAGAAGCAGAATGTGAGGTTGTACAGGGGAAGCCACTCCCTACTCTGTGGAACTCTCTTGTTAGCTTGTTTTCAGGTGTTACGAAGGCAATGTATTGTACTTCTCAAGGAACCAAGATAAGCATTCTGAAGGATGTTAGTGGCGTCATAAAGCCATCAAGGCTTACCCTTCTCCTTGGTCCACCTGGCAGTGGGAAAACGACCTTGTTATTGGCTCTGGCTGGAAAACTTGAGCAATCTCTTAAGGTGACTGGAGAAATCTCTTACAATGGTTACATGCTAGATGAATTTGTTCCTCAAAAAACATCATCTTACATAAGCCAGTATGACCTGCACATACCTGAGATGACAGTAAGGGAAACAGTTGACTTTTCAGCCCAATGCCAGGGGGTTGGAAGCAGAGCTGATATACTCACTGAAGTCAGCAGGAGAGAGAAGGAGGCAGGAATCATGCCTGACCCAGATATTGATACCTATATGAAGGCAATATCAGTTGAAGGACAACCAGAAAATCTACAAACCGATTACGTTTTGAAGATTCTTGGGCTGGATATCTGCGCTGACACAATGGTTGGTGATGCATTAGACAGAGGCATCTCAGGTGGACAGAAAAAAAGGCTAACAACAGGAGAGATGATTGTTGGTCCCATCAAAACACTGTTTATGGATGAAATATCAACTGGCCTGGACAGTTCCACAACTTTTCAAATAATTACCTGTCTCCAGCAGTTGGTGCACATCACCGATGCAACAGCAGTGGTTTCACTTCTTCAGCCAGCTCCTGAAACCTTTGAATTATTTGATGATCTTATATTGATAGCAGAGGGGAAGATTGTATACCATGGACCTCGCAGTCAAGCACTTCAGTTTTTTGAGGATTGTGGTTTCAAATGCCCAGAAAGAAAAGGAGTAGCAGACTTTCTTCAGGAAGTAACCTCTAAGAAGGATCAAGGGCAATACTGGTATCGTACAGATATTCCTTACAGCTATGTTTCAGTGGATCAGTTCTCTCAAATTTTTGAAACAAGTTACTGGGGACAGAGTGTAAATGATGAGCTCTCTCAACCATATGATAAATCTCAATCCCATAGAAATGTTTTATCATTTAGCAAGTACTCCTTGAGCAAATGGGAACTGTTCAAAGCTTGCATGAGGAGGGAGCTACTTCTCATGAAACGAAACTCTTTTATCTATGTATTCAAAACTGCACAGCTTACAATCACAGCAATCATAACAATGACAGTATTTATACGTACTCAGTTGGATGTAGATGTGAAGAGTGCTAACTTTTTACTGGGCGCGTTGTATTATACACTTGTCCGCCTCATGACCAATGGAGTTGCTGAGCTTATCTTGACTATTACTAGACTTCCGGTTGTTTACAAGCAGAAGGAATTCTATCTATATCCAGCATGGGCTTATTGCCTTCCAGCTTCCATTCTAAAGATTCCATTTTCAATTATTGATTCTATTGTCTGGACTTCAGTAACTTACTATGTCATAGGCTACAGTCCTGAAGTAGCAAGGTTCTTTCGTCAGTTTCTTTTGCTTTTCACTCTGCATTTATCATCAACATCCCTGTGCCGTTTCCTTGCCTCAGTTTTCCAAACTGATGTTGCAGCTACAACAGTTGGTTCCTTGTTCTTAGTACTGATGTTTTTGTTTGGAGGCTTCATTCTTCCCCGACCTTCATTACCTTGGTGGTTGAGGTGGGGTTTTTGGCTCTCTCCCATGACATATGGAGAAATTGGATTAACACTAAATGAATTTCTTGCTCCCCGCTGGCAGAAGATTCAAGAGGGAGGCATCGCCATAGGGAGGAAGGTTTTAAATAGTCATGGTTTAGACTTCAATGCAAACTTCTACTGGCTATCAATTGGGGCCTTGCTTGGTTTCACTGTACTTTTTGATTTTGGATTTATCTTAGCATTGAGTTACTTAAAACCTCCAAAGATGTCTCGAGCTTTGGTTTCCAAAACAAAGGCCTCTCAACTACAGGGAGGAGAAAATGGGAAGAGCGTGGAACTAGACAATATAACAGTTACAGTTGACATTAACCAGACCACAAAAGAAACACAAAACACAGGAAAAATGGTCCTACCTTTTCAGCCACTGACAATAGCATTTAAGGATGTCCAGTATTTTGTCGACACCCCTCCAGAGATGAAAAGACATGGGTCCAGTGAGAAAAAACTTCAATTGCTCCGTGACATCACAGGAGCATTTAGGCCAGGAGTTCTCACAGCACTGATGGGAGTGAGTGGAGCAGGGAAGACAACTCTTATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGGAGGATACTCTAAAGTGCAGAAGACGTTTGCAAGAGTCTCGGGTTACTGTGAGCAGAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTGACATACTCAGCATGGTTGCGATTACCAATGGATATTGATTCAGTCACAAAAGGGAAATTTGTAGAAGAAGTCATTGAAACAATTGAACTTGATGATATAAAAGATCGTTTAGTTGGCGTTGCTGGCCAAAGTGGCTTATCAACCGAACAACGTAAAAGACTTACCATCGCAGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACATCAGGTTTGGATGCCCGAGCAGCTGCAATAGTTATGCGTGCAGTGAAGAATGTGGTTGACACCGGCAGGACCACAGTTTGCACTATACACCAACCAAGCATTGACATATTTGAGTCTTTTGATGAGTTGATTCTAATGAAATCAGGAGGACAGATTATCTACAATGGAATGCTAGGTCACCAGTCGAGTAAACTGATTGAATACTTTCAGGGTATACCAGGAGTGCCAAAGATCAAAGACAACTATAATCCTGCAACCTGGATGCTGGAAGCTACCACTGCATCTGTTGAAGCTGAACTTAAAATAGACTTTGCAAAAATCTATAAAGAGTCAACTCTTTACCGGAACACCCTTGACTTGGTACAAGAGTTAAGTGAACCATTGCCAGGTTCAAAGGCCTTACAATTCTCAACTCGCTTTCCACAAAATAACTTGGGGCAGTTTACAGCATGCTTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAACCCGTTTCGTGTTCATGGTTGTAGCAGCTGTGATATTTGGGGCAGTATTTTGGCAGAAAGGGAAAGAAATAAACAATGAGCAGGATTTGTTCAACATACTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATAACTGTTCATCAATTTTACCGTACGTGGCAACTGAGCGCACTGTCTTGTACCGTGAAAAATTTGCCGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTAACCATTGAGATTCCATATATCTTATTGCAATCAATTTTGTACGTGGCTATCACTTATCCAATGATAGGTTACTATTGGTCGGTTGAGAAGGTCTTTTGGTACTTCTACACCACATTCTGTACATTTTTATACTTTGTATATCTTGGAATGTTGATAGTTTCGTTGAGCATGAATCTCGATTTAGCTTCCGTACTAGCAGCTGCAGTCTACACCATATTCAATCTTTTCTCTGGATTCCTCATGCCAGGACCGAAAATCCCTAAATGGTGGATCTGGTGTTATTGGCTTTGCCCCACATCTTGGTCCCTGAATGGCCTCTTAACTTCACAATATGGAGATATCGAAAAAGAGATACTCATATTTGGGGAGCGAAAACCAGTTGGTTCCTTTCTGAAAGACTATTATGGTTTCCATCATGATCGTTTAAGCCTTGTGGCCGTGGTTCTCATCGCTTTCCCCATTGCTTATGCATCTCTGTTTGCCTATTGCATAGGGAAATTGAATTTCCAAAAGAGGTAG 4347 0.4125 MELTPRGRNQHSPLSLSFDRDADSVLEQDREILSKWAAIEKLPTFKRIRTSFVDVIDDDNGRSGSSSSCNLRSESRRNLRSDSKRVVDVTKLAAVERRLLIDKLIKHIENDNLQLLLKLRERMERVNVKMPTVEVRYKNLHVEAECEVVQGKPLPTLWNSLVSLFSGVTKAMYCTSQGTKISILKDVSGVIKPSRLTLLLGPPGSGKTTLLLALAGKLEQSLKVTGEISYNGYMLDEFVPQKTSSYISQYDLHIPEMTVRETVDFSAQCQGVGSRADILTEVSRREKEAGIMPDPDIDTYMKAISVEGQPENLQTDYVLKILGLDICADTMVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIITCLQQLVHITDATAVVSLLQPAPETFELFDDLILIAEGKIVYHGPRSQALQFFEDCGFKCPERKGVADFLQEVTSKKDQGQYWYRTDIPYSYVSVDQFSQIFETSYWGQSVNDELSQPYDKSQSHRNVLSFSKYSLSKWELFKACMRRELLLMKRNSFIYVFKTAQLTITAIITMTVFIRTQLDVDVKSANFLLGALYYTLVRLMTNGVAELILTITRLPVVYKQKEFYLYPAWAYCLPASILKIPFSIIDSIVWTSVTYYVIGYSPEVARFFRQFLLLFTLHLSSTSLCRFLASVFQTDVAATTVGSLFLVLMFLFGGFILPRPSLPWWLRWGFWLSPMTYGEIGLTLNEFLAPRWQKIQEGGIAIGRKVLNSHGLDFNANFYWLSIGALLGFTVLFDFGFILALSYLKPPKMSRALVSKTKASQLQGGENGKSVELDNITVTVDINQTTKETQNTGKMVLPFQPLTIAFKDVQYFVDTPPEMKRHGSSEKKLQLLRDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYSKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPMDIDSVTKGKFVEEVIETIELDDIKDRLVGVAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRAVKNVVDTGRTTVCTIHQPSIDIFESFDELILMKSGGQIIYNGMLGHQSSKLIEYFQGIPGVPKIKDNYNPATWMLEATTASVEAELKIDFAKIYKESTLYRNTLDLVQELSEPLPGSKALQFSTRFPQNNLGQFTACLWKQHLSYWRSPEYNLTRFVFMVVAAVIFGAVFWQKGKEINNEQDLFNILGSMYIAVIFLGINNCSSILPYVATERTVLYREKFAGMYSSMAYSFAQVTIEIPYILLQSILYVAITYPMIGYYWSVEKVFWYFYTTFCTFLYFVYLGMLIVSLSMNLDLASVLAAAVYTIFNLFSGFLMPGPKIPKWWIWCYWLCPTSWSLNGLLTSQYGDIEKEILIFGERKPVGSFLKDYYGFHHDRLSLVAVVLIAFPIAYASLFAYCIGKLNFQKR 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1790 1448 FunFam ABC transporter G family member 34 862 1094 - -
Dere04g1790 1448 Pfam ABC transporter 876 1028 IPR003439 GO:0005524
Dere04g1790 1448 Pfam ABC-2 type transporter 520 731 IPR013525 GO:0016020|GO:0140359
Dere04g1790 1448 Pfam ABC-2 type transporter 1174 1386 IPR013525 GO:0016020|GO:0140359
Dere04g1790 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 440 IPR027417 -
Dere04g1790 1448 CDD ABCG_PDR_domain2 845 1083 IPR034003 -
Dere04g1790 1448 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 24 1448 - -
Dere04g1790 1448 SMART AAA_5 885 1077 IPR003593 GO:0016887
Dere04g1790 1448 SMART AAA_5 193 418 IPR003593 GO:0016887
Dere04g1790 1448 FunFam ABC transporter G family member 34 171 475 - -
Dere04g1790 1448 Pfam Plant PDR ABC transporter associated 736 798 IPR013581 -
Dere04g1790 1448 Pfam ABC transporter 184 366 IPR003439 GO:0005524
Dere04g1790 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 871 1081 IPR027417 -
Dere04g1790 1448 Pfam ABC-2 type transporter 1057 1125 IPR043926 GO:0140359
Dere04g1790 1448 Pfam ABC-2 type transporter 399 452 IPR043926 GO:0140359
Dere04g1790 1448 Pfam ABC-transporter N-terminal 106 159 IPR029481 -
Dere04g1790 1448 Gene3D - 165 434 IPR027417 -
Dere04g1790 1448 Gene3D - 863 1094 IPR027417 -
Dere04g1790 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 441 IPR003439 GO:0005524
Dere04g1790 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 848 1100 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1790 Dere-ChrDere04 20507448 20516459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1790 869 1060 Calmodulin-binding Proteins AT2G36910 28.019 3.55e-07 53.1