Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1769 ATGGAGAAAAAACGGCTGCGAAGACGACCATGGAATGGCTTACACGGTTATTCACACCCAATATCTTTGCTTTGCAGTGCATCCAACCCGTTAGACAAATTGTATGAGACATGCAAGATGGATTATGTGAATGAAAGACCAAATCAAGAGCTCGAAAACGAAAGTCCTTATATCCCTGAAATAACTGCTCAAAAGTCAGAATCTACCGTGGTGGCTGAACAAGGATCAGGTTGCAGAGGATTGTGTGCTACTCATCAGAGAACATGGAGGGGTATTGTTTACAAGAGCATAAAAGCTGTAGTTTTCTCAAATAGACTCAACTTGCTTATGCCTTGTGGACCTTTGGCAATTATTGTGGAGAAATTGACTAATCATCATGGTTGGGTCTTCACTCTGAGTTTGTTGGGTATAATGCCTCTGGCTGAGCGTCTAGGTTATGCTACAGAGTATATTGGGGGTCTTCTAAATGCCACTTTTGGAAATGCAACAGAACTGATCATTTCAATATATGCATTGAAAAGAGGAATGACGCGAGTTGTCCAGCTCTCTTTGCTGGGATCAATTTTGTCCAACATGTTGTTAGTGCTTGGTTGTGCGTTTTTATGTGGTGGGATTGTTTTTAATACGAAGGAGCAGGTTTTTAACAAGGCAAATGCTACGTTGAATTCTGGATTGTTGTTGATGGCAGTCATGGGCCTCCTTTTTCCTGCTGTTCTTCACTACACACACACCGAGGTGCATATGGGAAAGTCAGAGTTGGCCCTTTCAAGATTCAGCAGCTGCATCATGCTTGTGGCTTATGTTGCATACCTATTTTTTCAATTAAATAGTCAAAGAAATCTCTATGCCTCTCTAAACGAGGAGGAGGAGCATAGTGGAAACAACATAGAAGACAATGAATCTCCTGATATCTCTAAATGGGAATCTCTAATCTGGCTTTCAATTATGACTGCTGGAATATCAATTCTGTCGGAATATATAGTTGGCGCTATAGAGGGTGCATCAACTGCATGGAACATGCCAGTAGCTTTTATCAGCGTAATATTGCTTCCACTAGTGGGAAATGCTGCAGAGCATGCCAGTGCTATCATGTTTGCCATGAAAGATAAGCTTGATATTTCCTTGGGAGTAGCAATAGGGTCATCCACACAGATATCTATGTTTGTGATACCATTTTGTGTGGTTATTGGCTGGATAATGGGCCGTCCTTTGGACTTAAACTTTCAAATTTTTGAGACAGCAACACTGTTTATTACCGTTATAATTGTAGTCTTCTTGTTGCAGGAGGGAACTTCTAATTACTTCAAGGGACTTATGCTTATTCTATGCTATCTGATAGTGGCAGCTAGTTTTTTTGTACATGCAGATTCCTCTTCAGTAGGTGCAATGGTTTGGTATGAAACCGAAGACCCATGA 1416 0.4096 MEKKRLRRRPWNGLHGYSHPISLLCSASNPLDKLYETCKMDYVNERPNQELENESPYIPEITAQKSESTVVAEQGSGCRGLCATHQRTWRGIVYKSIKAVVFSNRLNLLMPCGPLAIIVEKLTNHHGWVFTLSLLGIMPLAERLGYATEYIGGLLNATFGNATELIISIYALKRGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVFNTKEQVFNKANATLNSGLLLMAVMGLLFPAVLHYTHTEVHMGKSELALSRFSSCIMLVAYVAYLFFQLNSQRNLYASLNEEEEHSGNNIEDNESPDISKWESLIWLSIMTAGISILSEYIVGAIEGASTAWNMPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIMGRPLDLNFQIFETATLFITVIIVVFLLQEGTSNYFKGLMLILCYLIVAASFFVHADSSSVGAMVWYETEDP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1769 471 FunFam Vacuolar cation/proton exchanger 297 453 - -
Dere04g1769 471 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 76 456 IPR004713 GO:0006812|GO:0008324|GO:0016020
Dere04g1769 471 FunFam Vacuolar cation/proton exchanger 149 288 - -
Dere04g1769 471 NCBIfam calcium/proton exchanger 113 452 IPR004798 GO:0006816|GO:0015369
Dere04g1769 471 Pfam Sodium/calcium exchanger protein 128 275 IPR004837 GO:0016020|GO:0055085
Dere04g1769 471 Pfam Sodium/calcium exchanger protein 310 449 IPR004837 GO:0016020|GO:0055085
Dere04g1769 471 NCBIfam calcium/proton exchanger 96 452 - -
Dere04g1769 471 Gene3D - 295 453 IPR044880 -
Dere04g1769 471 Gene3D - 148 290 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1769 Dere-ChrDere04 20230455 20238392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1769 50 456 Antiporters AT1G55730 68.193 0.0 571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1769 04 20230455 20238392 Dere04g1769 04 20230455 20238392 ECH