Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1766 ATGTCTGCAACGCTAAAGCTCTCGCTCTCCGCCGTCCGGCCACTCCGATTCTCCTCCGATGACTGCTTACCCTCCGCCGCCTCCTCCTCCGTCAGGTTCTTGCCGCTTCCATGTAGGGCTTCGATCCGGTCTTTCGCGACCGAGACACGCTCGTCGGTGATCGGATCCCGGCGGCCGGCGAGCCTATACGAGGTGCTCCAAGTCAGGCAGAACGCGTCCCCTAGGGAGATCAAGTCGGCGTACCGGAGTTTGGCTAAGATTTACCACCCTGATTCGGCGGTGCACCGATCGGAGCCCGACGGCATGAACTTCATCGAGATTCACAATGCCTACGCCACGCTTTCCGATCCGTCCGCGAGGGCGATCTACGATCTTTCTTTGATGGCTGTTCACGGGAAGAGCCGCCCGTTTTCGTCGTATTCGGTTCAGGATTGTCCTTCCGGGTTTTATTCGACCCGGAGATGGGAGACGGACCAATGCTGGATCTGCAAAAAGAGAGAATCAACTGGCATGGAGTGGATAAATGCAGCAGAAGATGGAGTTGCGAGCAGCTCCGAAAGTGAAAGCAGCACTCCTTGGTTCAAAGGGAGAGGACGTAGTGACAAAACTCCATGGAGACCCACATGTTATCATGTTGAAAACCTATTCGTTGCAGATTTCAGATTAAACATTCATCCTCGTTCTATAGGTACTTCAAAGAATCAAGATTACTATAAGCGAATGCTTCTGACGAATTCGCGGAGAGCGAGAACACGCACGCGCTGCCTCTGGTACGCTCTTCGATCAGATCGGAAGCGGAGAGATCATGTGCTGCGGAGGCAGGATGTGTATGCTGTGCACGTGCGTCATTCTGGTGGTGATCTTGATCGGGTTGCTCTTCGGGTTCGGAGTCTTCACGCATGGCTTCCACAAGCTCAAGAACACCTTCAGCTACTGCGATCCCACCGTCGCGGGAAGTTTGTGCGGGCATGCAAATGGAAGACCCTTCTTGGGCCACGCTCCGCCTCCGTTGTTCTAGGGTTTTTCGTTCCTCTCTCTCTGTTCATTCCGATTCATTCTTTCTCGGTTCTCTGGGGATTTGCTTCAAATTCTAGGTTTAGGGTTTTTTTTATTAACTCTTTAATTTGA 1128 0.5275 MSATLKLSLSAVRPLRFSSDDCLPSAASSSVRFLPLPCRASIRSFATETRSSVIGSRRPASLYEVLQVRQNASPREIKSAYRSLAKIYHPDSAVHRSEPDGMNFIEIHNAYATLSDPSARAIYDLSLMAVHGKSRPFSSYSVQDCPSGFYSTRRWETDQCWICKKRESTGMEWINAAEDGVASSSESESSTPWFKGRGRSDKTPWRPTCYHVENLFVADFRLNIHPRSIGTSKNQDYYKRMLLTNSRRARTRTRCLWYALRSDRKRRDHVLRRQDVYAVHVRHSGGDLDRVALRVRSLHAWLPQAQEHLQLLRSHRRGKFVRACKWKTLLGPRSASVVLGFFVPLSLFIPIHSFSVLWGFASNSRFRVFFINSLI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1766 375 CDD DnaJ 63 116 IPR001623 -
Dere04g1766 375 Pfam DnaJ domain 62 124 IPR001623 -
Dere04g1766 375 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 7 161 - -
Dere04g1766 375 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Dere04g1766 375 PRINTS DnaJ domain signature 63 81 IPR001623 -
Dere04g1766 375 PRINTS DnaJ domain signature 81 96 IPR001623 -
Dere04g1766 375 PRINTS DnaJ domain signature 99 119 IPR001623 -
Dere04g1766 375 ProSiteProfiles dnaJ domain profile. 61 127 IPR001623 -
Dere04g1766 375 Gene3D DnaJ domain 48 143 IPR036869 -
Dere04g1766 375 SMART dnaj_3 60 119 IPR001623 -
Dere04g1766 375 SUPERFAMILY Chaperone J-domain 61 150 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1766 Dere-ChrDere04 20189074 20197668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1766 63 124 C2H2 Transcription Factor Family AT1G74250 46.970 2.32e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1766 04 20189074 20197668 Dere04g1766 04 20189074 20197668 ECH