Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1753 ATGGCAGAAACTGCAGTGAACCTCGTGACTGACAAGTTGATCCCATTGTTGAGAGACGAAGCAACACTGCTGAGAGGTGTCCACGACAAAATCAGCTCCATCAAAGATCAGCTTGAGCTTATAAGAGCTTATGTGAAAGATGCAGATGAAAAGGCAGAAATGACAAACACGAGTAACCTAGAGAAAGAATGGGTGAAGAAAACAAGAGAAATTGCTTTTCGCATACAAGATGTGATTGATGAATACTTGTTAAAAGTGGGCCAGCGTCGTCCAAGAAAAGGGCTTGTTGGTGTTCTTATGAAAATTACTCACTTGCTTAGAACTGTAAAACCACGTCATAAGATTACATCTGAGATTGAAGATATAAGAGAATCAATCATGAGACTCAATCAAGGGACAGAGGCTCTTAAGTTCAACCCATCTTCACCAGAATCAAGCGATGCAGGGCGAAAGATGTCTACATCGAATGCACTTCGATTGGGTGCACATTTCATGGATGATGCTCAACTTGTGGGTGTAGATGATAACAAGAAATTACTCAATGATTGGTTGTCAAACACAGAAAGTAGGCGCACTGTGATCTCAGTAATCGGCGAAGGCGGACTCGGTAAAACAACTATTGTGAATAATATATACAAGAAGCAAAAAGAGGAAAGATCTTTCAATTGTTTTGCATGGATCACTGTTTCACGTTCAGTAAGAGTGGAAACATTACTGAAGACCATGATGCAGAGCTTTTATGAGAATGACGGTAACAAGCATGCCACCAAGGAAATTAATGAAATAATGGATAAGGGCACTTTGACAAATAAACTTAGAGAATACTTGCAAGGAAGGAGATATATGATAGTGTTTGATGATGTATGGGACACAACCTTTTGGGAATACGTTGAATTTGCATTACCTGATGACAACAAAAGCAGTATGATAATGATTACCTCAAGGAATATGGGCATTGCTGAATTTTGTAAACGTTTTGCACCGGTTCAAATACATGAGTTAAAACCTCTACCTCTAAATGATGCTTTAAGCCTCTTCAAACTTAAGGCTTTTCAGCTTGATTCTGAAGGTGAAGATTGTCCAAAAGAATTGATTAAATTATCTATGGACTTTGTTAAAAAGTGTGATGGAGTACCACTGGCAATTGTGACAATTGCTGGTCTCTTATCAACTAAAAAGAAAACTGAATATGAATGGCAAAGGGTACATGATAGCCTTCACTCAAAATTGGCAAGTGATCCCCATCTAAGAGGTTACTACCAAGTCTTATCAGAAAGTTACAATGATCTTCCTTATCACCTTAAGTTATGCCTTTCATACTTTGGCCTTTTTCCAGAAGACTACTCGATTAGCTGTGTGAGACTCGTTAACCTGTGGATTACAGAAGGGTTTGTAAAGCAAAAAGATAATGTGAATGAAACACTTGAAGAAGTAGCAGAAGAATACTTGGCTGAGCTAATTCGAAGAAGCTTAGTTAAAGTGTCAAATATGTCTAAAGGGAGAGTAAAAAGATGTCGAGTCCATGATTTAATGCACGACTTTATTCTTAAAAAGTGTGAGGAGCAGAACTTTTGCCAAGTGATAAAAAATGTGGGATTTAGCATCCATGAATGGACTAGACGCCTTTCAATCCATACAAACAGTACTGATGATGCTTTACAATGTGCAGCCAATTATGGTAAAGTGCGGTCTTGTTTGGTGTTTAACTTTAAAAACTTGCCGAAGCTTGTGGTAGAATCATTGCTATCGAGTTTCAAGTTGTTGACAGAATTGGACTTGGAAGATGCGCCTATTGATTATCTTCCCGAAGCAGTTGGGAATTTATTTCTTTTAAAATATTTAAGCTTGAAAAATACAAAGGTCAAGACCATTCCAAAATTCATTGGGAGGCTTCAGAATCTAGAGATTCTAGACCTAAAAAATAGTTTGGTTCATGAATTGCCAGTTGAGATTAATAAGCTTATCAAGCTGCGTTTTCTTGCAGGACATATTCCATTTGTATTTGAAGGTCATTTTGAAACCGTTCACGGTGTGAAATTGAAGGAAGGGATTGCAGGTCTAAAGGCTCTGCAGAAGCTATCAAATGTTGATGTAACTGATGGGGATGGGGTTATCACTGAACTAAAAAATTTGAATAAGATGAGGAGGTTGGCCATTGTGAAGCTAAGAGGACACCAAGGGAAATTATTATGCGCATCACTAGAGAGAATGAGCCATCTTTGTTCACTAGGTATTGCAGCAATAGAAGAACATGAAGTTCTTGATTTGCAATCATTGAATGATCCTCCTCGATATTTGCAGCGCCTTTACTTGCTAGGGCGTTTAGGGAGGCTTCCAGAATGGATTCCCAAGCTTAACAATCTAGTGCGTTTGGTATTAGTTTCATCAGGACTAATGGAAGATCCACTCTTCATTCTAAAAGACTTACCACAATTGTTGGAACTTGGGCTTTTCAAATCATATGAAGGTGAAGAGCTTCATTTTAAAGATGGATGGTTCAAAAAGTTGAAAAATTTAGCATTACGACAGATGCAAGGTTTGACTTCCTTAAAAATAGAAAAAAGAGCATTGCCTTTGCTTGAGGATCTTGCATTGTATAGCTGCCCACAACTGGTTGAGTTCCCCGTTGATCTTCAAAATTTGGAAACTCTCAAAAGATTTTACATTGAAGACATGCCAAGTCAATTTTCAATAAGTTTGTGGCTGAAGGAAGAAAAAGGCTATGACAAAATTAAAGAAGTAATCTTCGGTGATATAGAATAA 2763 0.3786 MAETAVNLVTDKLIPLLRDEATLLRGVHDKISSIKDQLELIRAYVKDADEKAEMTNTSNLEKEWVKKTREIAFRIQDVIDEYLLKVGQRRPRKGLVGVLMKITHLLRTVKPRHKITSEIEDIRESIMRLNQGTEALKFNPSSPESSDAGRKMSTSNALRLGAHFMDDAQLVGVDDNKKLLNDWLSNTESRRTVISVIGEGGLGKTTIVNNIYKKQKEERSFNCFAWITVSRSVRVETLLKTMMQSFYENDGNKHATKEINEIMDKGTLTNKLREYLQGRRYMIVFDDVWDTTFWEYVEFALPDDNKSSMIMITSRNMGIAEFCKRFAPVQIHELKPLPLNDALSLFKLKAFQLDSEGEDCPKELIKLSMDFVKKCDGVPLAIVTIAGLLSTKKKTEYEWQRVHDSLHSKLASDPHLRGYYQVLSESYNDLPYHLKLCLSYFGLFPEDYSISCVRLVNLWITEGFVKQKDNVNETLEEVAEEYLAELIRRSLVKVSNMSKGRVKRCRVHDLMHDFILKKCEEQNFCQVIKNVGFSIHEWTRRLSIHTNSTDDALQCAANYGKVRSCLVFNFKNLPKLVVESLLSSFKLLTELDLEDAPIDYLPEAVGNLFLLKYLSLKNTKVKTIPKFIGRLQNLEILDLKNSLVHELPVEINKLIKLRFLAGHIPFVFEGHFETVHGVKLKEGIAGLKALQKLSNVDVTDGDGVITELKNLNKMRRLAIVKLRGHQGKLLCASLERMSHLCSLGIAAIEEHEVLDLQSLNDPPRYLQRLYLLGRLGRLPEWIPKLNNLVRLVLVSSGLMEDPLFILKDLPQLLELGLFKSYEGEELHFKDGWFKKLKNLALRQMQGLTSLKIEKRALPLLEDLALYSCPQLVEFPVDLQNLETLKRFYIEDMPSQFSISLWLKEEKGYDKIKEVIFGDIE 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1753 920 Pfam Rx N-terminal domain 5 91 IPR041118 -
Dere04g1753 920 PANTHER DISEASE RESISTANCE PROTEIN RP 62 860 IPR044974 GO:0006952
Dere04g1753 920 Pfam NB-ARC domain 177 427 IPR002182 GO:0043531
Dere04g1753 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 440 IPR027417 -
Dere04g1753 920 FunFam Probable disease resistance protein At1g63360 427 517 - -
Dere04g1753 920 FunFam Probable disease resistance protein At1g61300 155 326 - -
Dere04g1753 920 Gene3D Ribonuclease Inhibitor 577 896 IPR032675 -
Dere04g1753 920 Gene3D - 152 327 IPR027417 -
Dere04g1753 920 PRINTS Disease resistance protein signature 193 208 - -
Dere04g1753 920 PRINTS Disease resistance protein signature 275 289 - -
Dere04g1753 920 PRINTS Disease resistance protein signature 375 389 - -
Dere04g1753 920 PRINTS Disease resistance protein signature 629 645 - -
Dere04g1753 920 Coils Coil 465 485 - -
Dere04g1753 920 CDD RX-CC_like 2 127 IPR038005 -
Dere04g1753 920 Gene3D - 337 425 IPR042197 -
Dere04g1753 920 Gene3D - 4 116 - -
Dere04g1753 920 SUPERFAMILY L domain-like 506 896 - -
Dere04g1753 920 Gene3D - 426 519 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1753 Dere-ChrDere04 20019277 20029572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1753 193 394 WRKY Transcription Factor Family AT5G45050 27.670 8.66e-08 54.3