Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1748 ATGCCATCCTTCTCTCCTCCTCCATCGTACACCGCACCATACAGTCTCTGTAATTTATATATTCCGTTTGCCTTCTCTGTTTTTTCTCTCTCTCTCTCTCGCCTTCACGTACCAATTCCAAGTTCATCAGGTTTGTCTGTTCTAGAATCCGCATTCTGTTTTGTTTCTCATTTTTACGATGATCACTGTGCATTGCTTGATCGAATCGGGAGTTTCATTCTGTTTGTCTCTGTTCTGGTTAGTTTTGTCCCCTTGGATCTGTGCGTGGTTGTGGATATTGCCCTTGAATGTGTCCATTCCGTGTTTGGCTTATGTGTTTTAGCTGCCAAAGTTTACGTGTCTTTGCTGATAAATAATAAATCTGCTGTAGATTTAATGGAGTCATCCTCTGGGGTTCATTTTTCTGGATTTCACATGAATGGTTTAGCACAGAGAGATGCTGGCACAGAGCAACCAACAACTTCAGCAACTGATATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGAGCTGCATCTGGGAAGACTACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAACGAGTTGTGCTTGTTAATCAGGATTCTTTTTATCATAATTTGACTGACGAGGAGCTTACAAGTGTTCAGGATTACAACTTTGACCATCCTGATGCTTTTGATACTGAGCAATTGTTACGGGTAATGGACAAGTTAAGGTGTGGCCAAGCTGTAGATATTCCAAAATATGACTTCAAGAGTTATAAGAGTGATGTATTTCCTGCAAGAAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGCATTCTTATATTCCATGATCCACGTGTTCGGGAGCTAATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCTAGGAGAATTAGGCGTGATACTGGTGAGAAGGCTCGGGATATTGGCTTAGTGCTTGATCAGTATTCTAAATTTGTGAAGCCGGCTTTTGATGACTTTATTCTTCCAACAAAGAAATATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATTGTACAGCATATCCGCACGAAGCTTGGTCAGCATGATCTGTGTAAAATATATCCTAATTTATATGTAATTCAGTCAACTTTTCAGATAAGGGGTATGCATACCCTGATACGTGATTCTCAGACAACGAAGCATGATTTTGTGTTTTATGCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGCCTGGGGCATCTTCCATTTACAGAAAAGCAAGTAATCACTCCAACTGGATCTGTATATACTGGTGTGGATTTTTGCAAGAGGTTATGTGGTGTCTCTGTTATCAGGAGTGGAGAGAGTATGGAGAATGCTTTACGTGCATGCTGTAAAGGTATCAAGATTGGTAAAATTCTAATTCATAGAGAAGGTGACAATGGTCAGCAGCTAATATATGAGAAGTTGCCTAATGATATCTCAGATAGGCATGTGTTACTGTTGGATCCTATCCTAGGCACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTTTAAGAAAGGGTGTACCAGAGCCCAACATCATATTTCTCAATCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAAAGTTTTCCGAGAATAAAAATTGTGACATCCGAGATTGATATTGGTTTGAATGAAGATTTTCGCGTCATACCCGGCATGGGTGAGTTTGGGGACCGGTATTTTGGAACAGACGATGATGACCTGCAGGTGGTGGCCCCTTCGGAATAG 1785 0.4073 MPSFSPPPSYTAPYSLCNLYIPFAFSVFSLSLSRLHVPIPSSSGLSVLESAFCFVSHFYDDHCALLDRIGSFILFVSVLVSFVPLDLCVVVDIALECVHSVFGLCVLAAKVYVSLLINNKSAVDLMESSSGVHFSGFHMNGLAQRDAGTEQPTTSATDMYKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVNQDSFYHNLTDEELTSVQDYNFDHPDAFDTEQLLRVMDKLRCGQAVDIPKYDFKSYKSDVFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTGEKARDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPEPNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDLQVVAPSE 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1748 594 Pfam Uracil phosphoribosyltransferase 381 582 - -
Dere04g1748 594 FunFam Uridine kinase 160 366 - -
Dere04g1748 594 CDD UMPK 165 363 IPR000764 -
Dere04g1748 594 Gene3D - 367 582 IPR029057 -
Dere04g1748 594 FunFam Uridine kinase 367 582 - -
Dere04g1748 594 NCBIfam uridine kinase 162 363 IPR000764 -
Dere04g1748 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 356 IPR027417 -
Dere04g1748 594 SUPERFAMILY PRTase-like 366 583 IPR029057 -
Dere04g1748 594 PANTHER URIDINE KINASE 153 492 - -
Dere04g1748 594 CDD PRTases_typeI 440 555 IPR000836 -
Dere04g1748 594 Gene3D - 159 366 IPR027417 -
Dere04g1748 594 Pfam Phosphoribulokinase / Uridine kinase family 165 351 IPR006083 GO:0005524|GO:0016301
Dere04g1748 594 PRINTS Uridine kinase signature 193 204 - -
Dere04g1748 594 PRINTS Uridine kinase signature 331 344 - -
Dere04g1748 594 PRINTS Uridine kinase signature 295 305 - -
Dere04g1748 594 PRINTS Uridine kinase signature 309 320 - -
Dere04g1748 594 PRINTS Uridine kinase signature 163 180 - -
Dere04g1748 594 PRINTS Uridine kinase signature 238 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1748 Dere-ChrDere04 19936011 19947221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1748 117 585 PRT Gene Family AT4G26510 84.501 0.0 818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1748 04 19936011 19947221 Dere05g1214 05 19476344 19485451 CCT