Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1706 ATGCGTCCAAGAAGCACTCTCATCTTCTTTCTCTTGGCCGTCTTCGGCTTCTTGCACCCAAACCCCGCGGTTCTCGCCGTACCTACGTCTTTCGAGTTCCCATCTTTCAATCTTCGAAACGTCACTCTTCTGGGCGATTCCTATCTCAGGAAAGGCGTCGTCGGTCTCACCAGAACCATCGACGTCCCCAGTTCCAGCGCCGGAGCCGTAATTTACAACGAACCCATCTCTCTCTTCGACCCGGAATCAAACACCTCGTTTTCATTCTCAACAAGATTCGCATTCTTCATCACCTGCGTCAATCCAAGCTCGTTCGGTGACGGATTAGCGTTCTTTCTTTCTCCGAATAACGATAGTTTCGGGAGCCCCGATGGGTACCTGGGTCTCGTCAATTCGTCCCAGTTGACTCGAAACAAGTTCGTCGCGATCGAGTTCGACACCCGTCTCGATTCGAATTTGAAAGACCCGAATGAGAATCATGTTGGGTTGGATCTAGATAGTACGGTTTCCTTAAAGACTGGGGATCCGGTCTCGCAAGGGATTGACTTGAAGAGTGGGAAATTGATCACAGCTTGGATTGATTACATGAGCGACAAAAGGAGTCTAGACGTTTCGTTGAGTTATACGAGCTTTAAGCCCGAGAAGCCGATTCTGAGTGTTAAAGTTGACCTTTCTGATCATTTGACAGGGAAATTGTATGTGGGGTTTTCAGCTTCTACGGAGGGAAGCACTGACCTTCATCAGATTAAGAATTGGAGCTTTCAGGCTTTCGGATTTGTTCCTGCAAGACCAAGATCTCATCCTCACAATGTTTCAGATAGCTCAGTGACTGTCACAGGAGGCATTCCCAAATCAGATTCCAGAAAGAAGTATGACAAGAGTCTTGAATTAGGTGTTGCTATTGCTGGTCCTGCATTTTTCTGTGTAGTACTTTCAGTTTTGGGGTATATTTCTGTACGGAAATGGAGAGATATTAGAAAACAGAGCAGCTTCAAAACAGAGTTTGTGGCTTGTCCAAGGGAATTCAGTTACAAAGAGTTGAAAGCAGCCACAAAAGGGTTTCACGCCAGTAGGATCATAGGACATGGATCGTTTGGGACAGTTTATAAAGCTTTCTTTTTATCTACTGGAACTATTGCGGCTGTCAAAAGGTCAAGAGACTCCCATGAAGGTGGAACAGAATTTCTGGCTGAACTGTCCATCATAGCTGGTTTGAGGCACAAGAACTTGGTTCAGCTTCAAGGTTGGTGTGTTGAGAAAGGTGAATTGTTGCTTGTGTATGACTTTATGCCCAATGGTAGCTTAGACAAGATTCTTTACAAGGAATCTGATGGAGATAACTTATTGGACTGGTCTCACAGACTCAATATTGCTATTGGGGTAGCTTCTGTTCTTACTTATCTTCATCAAGAGTGTGAGCAGAGAGTCATTCATAGAGACATTAAGACTGGAAATATATTGCTAGATGGAAATTTCAATCCGAGGCTGGGTGATTTTGGATTGGCGAAGCTCATGGATCACGATAAAAGCCCTGTTTCAACATTAACTGCTGGAACAATGGGATACCTTGCACCTGAGTATCTTCAGTATGGGAAAGCAACTGAGAAAACTGATGTTTTCAGCTATGGAGTTGTTGTGCTTGAAGTGGCCTGTGGGCGGAGGCCAATTGAAAGAGAGGGACAGAAAATGGTGAATTTGGTTGATTGGGTTTGGGGGCTTCACTCTGAAGGAAAGATAATTGAAGCAGCTGATAAAAATTTGAATGGAGAATTTGAGGAAGAAGAAATGAGAAAGTTATTATTGTTAGGCTTGAGCTGTGCTAACCCTGATAGTGCAGAGAGGCCTTCCATGAGAATAGTGCTTCAGATTCTCAACAATGAAGCAGCACCTCTTTTCGTGCCCAAGGTGAAACCAAGCCTTACCTTCTCTTGCGGATTGCCTTTGACTATTGATGAGATTGTTTCAGATACTGAAGACTTCTATACCACCCAGTCTATGTGTGAGATTAAAATTTACTGA 2019 0.4418 MRPRSTLIFFLLAVFGFLHPNPAVLAVPTSFEFPSFNLRNVTLLGDSYLRKGVVGLTRTIDVPSSSAGAVIYNEPISLFDPESNTSFSFSTRFAFFITCVNPSSFGDGLAFFLSPNNDSFGSPDGYLGLVNSSQLTRNKFVAIEFDTRLDSNLKDPNENHVGLDLDSTVSLKTGDPVSQGIDLKSGKLITAWIDYMSDKRSLDVSLSYTSFKPEKPILSVKVDLSDHLTGKLYVGFSASTEGSTDLHQIKNWSFQAFGFVPARPRSHPHNVSDSSVTVTGGIPKSDSRKKYDKSLELGVAIAGPAFFCVVLSVLGYISVRKWRDIRKQSSFKTEFVACPREFSYKELKAATKGFHASRIIGHGSFGTVYKAFFLSTGTIAAVKRSRDSHEGGTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKILYKESDGDNLLDWSHRLNIAIGVASVLTYLHQECEQRVIHRDIKTGNILLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVVLEVACGRRPIEREGQKMVNLVDWVWGLHSEGKIIEAADKNLNGEFEEEEMRKLLLLGLSCANPDSAERPSMRIVLQILNNEAAPLFVPKVKPSLTFSCGLPLTIDEIVSDTEDFYTTQSMCEIKIY 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1706 672 PANTHER - 56 634 - -
Dere04g1706 672 SMART serkin_6 354 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1706 672 Pfam Legume lectin domain 29 256 IPR001220 GO:0030246
Dere04g1706 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Dere04g1706 672 CDD STKc_IRAK 360 626 - -
Dere04g1706 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 262 IPR013320 -
Dere04g1706 672 MobiDBLite consensus disorder prediction 268 287 - -
Dere04g1706 672 MobiDBLite consensus disorder prediction 268 282 - -
Dere04g1706 672 ProSiteProfiles Protein kinase domain profile. 354 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1706 672 CDD lectin_legume_LecRK_Arcelin_ConA 29 258 IPR001220 GO:0030246
Dere04g1706 672 Gene3D - 28 259 - -
Dere04g1706 672 SUPERFAMILY Protein kinase-like (PK-like) 338 648 IPR011009 -
Dere04g1706 672 Gene3D Phosphorylase Kinase; domain 1 317 429 - -
Dere04g1706 672 FunFam L-type lectin-domain containing receptor kinase VIII.1 27 267 - -
Dere04g1706 672 FunFam L-type lectin-domain containing receptor kinase VIII.1 430 642 - -
Dere04g1706 672 FunFam L-type lectin-domain containing receptor kinase VIII.1 318 429 - -
Dere04g1706 672 Gene3D Transferase(Phosphotransferase) domain 1 430 631 - -
Dere04g1706 672 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Dere04g1706 672 Pfam Protein kinase domain 354 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1706 Dere-ChrDere04 19478398 19480416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1706 4 659 Receptor kinase-like Gene Family AT5G55830 63.284 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere04g1706 Pkinase 1.4e-48 CL0016