Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1696 ATGGCTTCCACCAAGGAACGTAAGAACTACGTCTACATCGCCAAGCTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCGATGAAGAAGGTGGCTAATCTCAATGTTGAATTGACGGTTGAAGAGCGAAATCTTCTTTCGGTTGGGTATAAAAATATAGTGGGTTCTAGGAGGGCGTCGTGGAGAATTTTATCCTCGATCGAGCAGAAGGAAGAAGCCAAAGGGAACGATCTGAATGTGAAGAGGATAAAGGAGTATAGGCAAAAAGTGGAATCAGAACTGTCCAATATCTGCAACGATATTATGAAAGTTATTGATGAGCATCTTATTCCCTCCTGCTCGGGTGGTGAATCCAGTGTGTTTTTCTACAAAATGAAAGGAGACTATTATCGCTATCTGGCTGAATTTAAGGCTGGTGATGAAAGGAAAGAGGCTGCTGATCATTCGATGAAAGCTTATCAGGCAGCTTCTACTACAGCAGAGGCTGAGTTGCCTCCCACACATCCCATCAGACTGGGCCTTTGA 531 0.4463 MASTKERKNYVYIAKLAEQAERYEEMVDAMKKVANLNVELTVEERNLLSVGYKNIVGSRRASWRILSSIEQKEEAKGNDLNVKRIKEYRQKVESELSNICNDIMKVIDEHLIPSCSGGESSVFFYKMKGDYYRYLAEFKAGDERKEAADHSMKAYQAASTTAEAELPPTHPIRLGL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1696 176 PANTHER 14-3-3 PROTEIN 7 176 IPR000308 -
Dere04g1696 176 Coils Coil 13 33 - -
Dere04g1696 176 Gene3D - 1 176 IPR036815 -
Dere04g1696 176 PRINTS 14-3-3 protein zeta signature 154 176 IPR000308 -
Dere04g1696 176 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Dere04g1696 176 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Dere04g1696 176 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Dere04g1696 176 SMART 1433_4 7 176 IPR023410 -
Dere04g1696 176 SUPERFAMILY 14-3-3 protein 6 176 IPR036815 -
Dere04g1696 176 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Dere04g1696 176 Pfam 14-3-3 protein 14 176 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1696 Dere-ChrDere04 19121842 19122372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1696 1 176 14-3-3 family AT2G42590 78.977 3.48e-102 293