Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1673 ATGAGAATAATGGGGTTTTCTAAAGTTCTAGTCTTTTCTGTTTTGGCTTTGTGGGTTTGGGTTCAGGTGGGTTTAGCAGAAGGAGAATCTGCATATGGCCATGGCAACGTCAGCAACTACATTAGCTGGAAGGATTTGTGGGTGGATGAGCAGAGGTTGGGCTTGAACTCCATTAAGGATGTTCGAGTTATTGTCGTCGACCAGCATGGCAGGGGACATTCTAAGACTGTACAAGGAGCTGTGGACATGGTTCCAGACGGCAACACAGAAAGGATCAAAATTTACATATACCCCGGAATTTACAGAGAGAAAGTGTTTGTGCCAAGGACGAAGCCATATGTATCAATGGTAGGAGGAAGAAATGGAACAATGAGTGCAGTGATTACTTGGAACAGCAAGTCATCGGACAGAGGTTTTGATGGCCAAGCTCTGGGCACATATGCTTCAGCAACTGTAGCAGTAGAATCTGATTATTTCTGTGCAACTAAGCTCACTTTCCAGAACTCAGTGGTTGCAGTGAGTGGTGGAAATGGAATGCAAGCAGTAGCACTGAGGGTGGACAGTGAAAGAGCCATGTTCTATAGAGTTAAAATCAAGGGGGCACAAGACACTCTCTTGGACAACACGGGCACCCATTACTTCTACCAGTGTCAAATCCAAGGAAAAGTTGATTTCATCTTTGGCTCTGCTAAATCACTCTATCAGAACTGTCATCTTCAGTCCATAGCTGAGGACTATGGAGCAATTGCAGCTCATCACAGGGATTCACCAAATGAAGACACAGGCTTTTCCTTTGTAGGCTGCACAATCAGAGGCACTGGTAGTGTCTACCTTGGAAGAGCTTGGGGGGACTATTCCAGAATTATATACTCACAATGCTACATGGATGCTATTGTTATTCAACAAGGATGGACTGAATGGAATCACCCATCAAGGAAGAGGACCGCTGTGTTTGGGGAGTATCAGTGTAAGGGAAGAGGAGCAGATAGAAGAGGAAGGGTAAGATGGTCAAAGTCTATGAGCTACGAGGAAGCAAGGCCTTTTCTGGACCAGAGCTTTATAAACGGGGACCAGTGGCTTAAGCTATAG 1089 0.4527 MRIMGFSKVLVFSVLALWVWVQVGLAEGESAYGHGNVSNYISWKDLWVDEQRLGLNSIKDVRVIVVDQHGRGHSKTVQGAVDMVPDGNTERIKIYIYPGIYREKVFVPRTKPYVSMVGGRNGTMSAVITWNSKSSDRGFDGQALGTYASATVAVESDYFCATKLTFQNSVVAVSGGNGMQAVALRVDSERAMFYRVKIKGAQDTLLDNTGTHYFYQCQIQGKVDFIFGSAKSLYQNCHLQSIAEDYGAIAAHHRDSPNEDTGFSFVGCTIRGTGSVYLGRAWGDYSRIIYSQCYMDAIVIQQGWTEWNHPSRKRTAVFGEYQCKGRGADRRGRVRWSKSMSYEEARPFLDQSFINGDQWLKL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1673 362 FunFam Pectinesterase 59 362 - -
Dere04g1673 362 SUPERFAMILY Pectin lyase-like 63 361 IPR011050 -
Dere04g1673 362 Pfam Pectinesterase 64 357 IPR000070 GO:0030599|GO:0042545
Dere04g1673 362 Gene3D - 62 362 IPR012334 -
Dere04g1673 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 57 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1673 Dere-ChrDere04 18799500 18802080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1673 8 314 Carbohydrate Esterase AT5G55590 53.939 1.82e-122 354