Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1651 ATGCAAACTTCTGAGAAACATAAAGTTTCCTATGGCCCTGGAAGGTTCTACATTGAGAACAAAGACAATAACTCATCCTCTGATAACACCAGCCAAGCAACCTACTCGTCAGTTCAGACTTTAGAACAATATTGTACCCTTGAATCTTCTTCAAGAACTGACAGTTTCCCTCACCATAATAATTCTCCATCTGCTGTCAATTTCTCGCCCAATGACAGCCCAGTGTCACAGCTGGAGTCAAAATCTTATGCACTAATGCCACAACACTCTCTCGACATCATTCATGGCTCACTGGAGGACAAATCTTGCTTGACGCATGATCTTGATGACTTGAGTCACAAGATAAGAGAGCTTGAAACTGCTATGCTGGGACCTGATACAGATATTATAGATATATATGATACTCTAGTTCCATTGGAATCTAATCTGATTTTGTCAGAGGCAGAGAAGTGGAAGCCAATGATGGAGATAGTGTCTAGAGGGGATTTGAAAGAGATGCTTTGTGCTTGTGCAAAAGCAATGGCCGTGAATGATATGGAGACAACTGAATGGTTAATGTCTGAGCTGCGGAAAATGGTTTCCATTTCAGGCAATCCAGTCCAACGAATAGGAGCTTATATGTTGGAGGCTCTTGTTGCAAGGATTGCCTGTTCTGGAACTGCAATCTACAAAGCCTTAAAATGCAAGGAGCCCACTGGTAACGAACTTCTTTCTTACATGCACCTGCTATATGAAATCTGCCCATACTTCAAATTTGGGTATTTGTCAGCAAATGGGGCAATCGCTGAAGCCATGAAGGAGGAAAATAGAGTCCATATCATTGATTTTCAGATCAATCAGGGCACCCAGTGGGTAAGCCTAATTCAGGCTCTTGCTGGTCGACCAGGAGGGCCCCCAAAGATCAGGATAACTGGCGTAGATGACTCTACTTCAAATTTTGCCCGTGGAGGAGGGCTTGATATTGTGGGGAAAAGGTTATCTAAACTTGCACAATCATGTCAGGTTCCCTTTGAGTTCCATGCTGTTGGAGTTGCTGCTTCTGAGGTGCAACTCGAAGACCTTGAGCTTCGACCTGGCGAAGCTGTTGCAGTAAATTTTGCCATGATGCTGCACCATGTGGCAGATGAAAGTGTGGACAGTCAGAATCCCCGAGAACGGTTGTTAAGATTGGCCAAGCACTTGTCCCCAAAAGTAGTGACCCTTGTGGAGCAAGAATCTAACACCAACACTCTTCCATTCTTCCCACGCTTTATCGAGACTCTGAACTATTACTTGCCTGTTTTTGAGTCAATCGATATTGTTCTGCCAAGGGAGCACCGGGAGAGGATCAATGTGGAACAGCATTGTCTGGCGCGAGAACTTGTCAACTTAGTAGCGTGTGAAGGAGCAGATAGAGTGGAACGCCACGAGCCTCTGAGGAAGTGGAGGTCGCGCTTTGCAATGGTGGGATTCACACCGTATCCATTGAGCTCCTTTGTCAACTCTACCATCAAGAATTTGCTGGAGAACTACTGTGGAAATTACACTCTAGAAGAGAGAGATGGTGCACTATACCTTGGTTGGATGAATCAAGCTCTTGTTGCCTCTTGTGCTTGGAGGTGA 1602 0.4494 MQTSEKHKVSYGPGRFYIENKDNNSSSDNTSQATYSSVQTLEQYCTLESSSRTDSFPHHNNSPSAVNFSPNDSPVSQLESKSYALMPQHSLDIIHGSLEDKSCLTHDLDDLSHKIRELETAMLGPDTDIIDIYDTLVPLESNLILSEAEKWKPMMEIVSRGDLKEMLCACAKAMAVNDMETTEWLMSELRKMVSISGNPVQRIGAYMLEALVARIACSGTAIYKALKCKEPTGNELLSYMHLLYEICPYFKFGYLSANGAIAEAMKEENRVHIIDFQINQGTQWVSLIQALAGRPGGPPKIRITGVDDSTSNFARGGGLDIVGKRLSKLAQSCQVPFEFHAVGVAASEVQLEDLELRPGEAVAVNFAMMLHHVADESVDSQNPRERLLRLAKHLSPKVVTLVEQESNTNTLPFFPRFIETLNYYLPVFESIDIVLPREHRERINVEQHCLARELVNLVACEGADRVERHEPLRKWRSRFAMVGFTPYPLSSFVNSTIKNLLENYCGNYTLEERDGALYLGWMNQALVASCAWR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1651 533 Coils Coil 101 121 - -
Dere04g1651 533 MobiDBLite consensus disorder prediction 19 35 - -
Dere04g1651 533 MobiDBLite consensus disorder prediction 49 74 - -
Dere04g1651 533 Pfam GRAS domain family 164 533 IPR005202 -
Dere04g1651 533 ProSiteProfiles GRAS family profile. 154 533 IPR005202 -
Dere04g1651 533 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 107 527 IPR005202 -
Dere04g1651 533 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1651 Dere-ChrDere04 18555097 18556698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1651 1 533 GRAS Transcription Factor Family AT1G50600 57.542 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere04g1651 GRAS 1.7e-132 CL0063