Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1648 ATGCCGAGTGCGAACCCTGACTCATCGGACAAAGATTCCGAGCCGTTCGTCGAAACCGACCCGACCGGAAGATACGGCCGGTACGGTGAGCTTCTGGGATCCGGTGCGGTGAAGAAAGTGTACAGAGCATTTGATCAAGAAGAAGGAATAGAGGTGGCGTGGAACCAGGTGAAGCTCAGGAACTTCAGCGACGACCCAGCCATGGTGGATCGGCTCTACTCCGAAGTGAGATTGCTGAGAAGCCTGACCAACAAGAACATCATTGCGCTCTACAATTTCTGGAGGGATGACAAACGGAACACTCTGAACTTCATCACTGAGGTCTGTACGAGCGGAAATCTGAGGAAGTACAGGAAGAAGCACAGGCATGTGTCGATGAAGGCGCTGAAGAAATGGTCTTTGCAGATTCTGAAAGGGCTGAACTATCTGCATATGCACGAGCCTTGTATCATCCACAGGGATCTCAATTGCAGTAATGTGTTCGTCAACGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGATTGGCAGCAATAGTGGGGAAGAACCACTCTGCACATTCAATTCTGGGGACACCAGAATTCATGGCGCCAGAGTTGTATGACGAGGACTACACTGAACTGGTGGATATATATTCATTTGGGATGTGTGTGTTGGAGATGGTGACAATGGAGATTCCTTACAGCGAGTGTGACAATGTGGCGAAGATATACAAGAAGGTTACTTCAGGGGTGAGACCTCAGGCATTGCACAAGGTTAGAGATCCAGAGGTAAAGGCTTTCATTGAGAGGTGCCTTGCTCAGCCAAGAGCAAGACCTTCTGCTGCTCAGCTCCTCAGGGATCCTTTCTTTGATGGGATTGTTGATGATGACGAAAGTTACTATTCTACTTCTTCATGA 900 0.4889 MPSANPDSSDKDSEPFVETDPTGRYGRYGELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVDRLYSEVRLLRSLTNKNIIALYNFWRDDKRNTLNFITEVCTSGNLRKYRKKHRHVSMKALKKWSLQILKGLNYLHMHEPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTMEIPYSECDNVAKIYKKVTSGVRPQALHKVRDPEVKAFIERCLAQPRARPSAAQLLRDPFFDGIVDDDESYYSTSS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1648 299 SUPERFAMILY Protein kinase-like (PK-like) 21 291 IPR011009 -
Dere04g1648 299 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Dere04g1648 299 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1648 299 PIRSF TyrPK_CSF1-R 25 128 - -
Dere04g1648 299 PIRSF TyrPK_CSF1-R 116 281 - -
Dere04g1648 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 285 - -
Dere04g1648 299 CDD STKc_WNK 24 284 - -
Dere04g1648 299 FunFam probable serine/threonine-protein kinase WNK9 109 291 - -
Dere04g1648 299 MobiDBLite consensus disorder prediction 1 22 - -
Dere04g1648 299 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Dere04g1648 299 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Dere04g1648 299 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1648 Dere-ChrDere04 18515355 18516608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1648 5 288 MAP Kinase Kinase Kinase AT5G55560 82.042 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere04g1648 Pkinase 1.1e-52 CL0016