Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1647 ATGATCCATTCGAGGTACCTGTTGGGAAGTTTCTTTCTTCTGCTGCCGAAAAACCAGACCACAAAAATGCAAAGCACAAGAGGTATCAACTTCACTGTGTTTTTAAGGAAGACCCTGCAGCTTTTCCTTTCTCTTCTTCCTCTCTTCATCATAATCTGTGTAGAAGGTGAGTTTTCAGAATCTGAGCCTTTCTTCAAATTCATTAGAGCCATTGATCCCCAAAACGTGCTTAACATTAATGGGTCGGCAATGATATTACATCCCTGCATGCTCAGGTTAAAGGGTGTGAGATGCAACTCCAAAGGTACCAACATTATAGAAATAAGGTTAGAAAACTTGAACCTTGGTGGAACGATCGATGCAGATTCGCTATGCAGGCTCAGAAAGCTGAGAGTTGTGAGCTTAGCTGAGAATAATATTAGAGGAAATGTTCCAAACTCAATTTTGCAATGTGCAAGGTTGAGTTATCTGAATCTAACAGGCAATCATTTGAGTGGGAGGTTTCCTACAAGTTTAATGAAATTGAAATTTCTAAGGAAATTAGACATCTCAAACAATAATTTTTCTGGGATCATCCAAAGTCAACAAGAAATTAGACATCTCTCTGCTTATTCAGTGGCTTCAAGAATATCACTGAATGATCATATGAATACCAGACTTGGCCTAAAGGAAGAGGATAAATTGCAACCAGTGGCAGATCCTCCTAGTACTAGCCATAGTAGATCTAATAAGTTCGGATTCAATTTCTCCAACCCATTAGTTTGGGGCATTGGATTGTTATTATCATTGTTGTTCTTTTACTTTGTGGGCAAGAAGGTTGCAAAATTAAGCGCAGAGAATGGGAAGGCACTGAAAAGTCATAAGGAGTCTAAGATCAGAAAGGCTTCAACTGAGGTCACAAACCAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGAGAAGCTGAAGAAAAGAGACACAGAGCTTGTGTTCTTTGTTGAAGAGCACGAAAGGTTCACACTGGAGGACCTGCTTCAAGCCACGGCTGACTTAAGAAGTGAAAGCTTTTGCAGTAGCCTTTATAAGGTAAAACTCAAGAACGAAGTCCATTATGCAGTCAAGAGATTAAGGAATTTGCAGGTATTGTCAGATGACTTCTGCGAAATGTTGAGGCAGATAAGTAAGTTGAAACATCTAAATATCCTTCCCCTTGTTGGTTACCGTTCTACAAGTGAAGAAAAACTCATCATTTACAAATATCAAAGCAATGGAAGTCTGCTAAATCTTTTTGAGGACTATCTTGAAGGTAAAAAAGATTTTCCATGGAAACTGCGGCTATCTATAGCATGTGGGATTGCAAGGGGTTTGGCATTCATATATCGGAAGGTGGAAGAACAGGAGATCATTCCTCATGGAAATCTTAAGCTATCAAATATTCTTCTCAATGATAACAATGAACCACTAATAAGCGAGCATGGATTATCAAAATTCCTGGACCCAAATAAAGGATTCCTCTATTCTGCTCATGCATATACAGCTCCAGAGAAGGCTTTAACAGAAAAAGGCGACGTTTACAGCTTCGGAGTGATTCTCCTGGAATTATTAACAGGAAAAAGCATAGAAATGAGTAGAATAGACCTTACAAGATGGGTCAGGTCCATGGTGAGGGAGGAATGGACAGGAGAGGTCTTTGACAAAGAGGTTAGGGAAGCTGAATATCAGTCGGCATTACCTGTGCTGAACATAGCCCTCATGTGTGTATCCCGTCAGCCTGAAAATCGGCCAAGCATGGAAGAGATTTTGGAGAAGATACAGGAAGTAATGAATGAAGAACAGCAGGAATGTGATGTTTCAATATGCTGTCCTGTTGGATCCAACCATGAAGATTGCTGCTCACTTCACAAGATCATACCCGATACATGGGATTCTCCAGGATCAAATTATTGA 1935 0.3984 MIHSRYLLGSFFLLLPKNQTTKMQSTRGINFTVFLRKTLQLFLSLLPLFIIICVEGEFSESEPFFKFIRAIDPQNVLNINGSAMILHPCMLRLKGVRCNSKGTNIIEIRLENLNLGGTIDADSLCRLRKLRVVSLAENNIRGNVPNSILQCARLSYLNLTGNHLSGRFPTSLMKLKFLRKLDISNNNFSGIIQSQQEIRHLSAYSVASRISLNDHMNTRLGLKEEDKLQPVADPPSTSHSRSNKFGFNFSNPLVWGIGLLLSLLFFYFVGKKVAKLSAENGKALKSHKESKIRKASTEVTNQEEEEEEDDDDDDDEKLKKRDTELVFFVEEHERFTLEDLLQATADLRSESFCSSLYKVKLKNEVHYAVKRLRNLQVLSDDFCEMLRQISKLKHLNILPLVGYRSTSEEKLIIYKYQSNGSLLNLFEDYLEGKKDFPWKLRLSIACGIARGLAFIYRKVEEQEIIPHGNLKLSNILLNDNNEPLISEHGLSKFLDPNKGFLYSAHAYTAPEKALTEKGDVYSFGVILLELLTGKSIEMSRIDLTRWVRSMVREEWTGEVFDKEVREAEYQSALPVLNIALMCVSRQPENRPSMEEILEKIQEVMNEEQQECDVSICCPVGSNHEDCCSLHKIIPDTWDSPGSNY 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1647 644 Gene3D Ribonuclease Inhibitor 68 221 IPR032675 -
Dere04g1647 644 Gene3D Phosphorylase Kinase; domain 1 310 416 - -
Dere04g1647 644 Gene3D Transferase(Phosphotransferase) domain 1 418 618 - -
Dere04g1647 644 Pfam Protein tyrosine and serine/threonine kinase 359 599 IPR001245 GO:0004672|GO:0006468
Dere04g1647 644 MobiDBLite consensus disorder prediction 287 317 - -
Dere04g1647 644 SUPERFAMILY L domain-like 78 196 - -
Dere04g1647 644 MobiDBLite consensus disorder prediction 301 315 - -
Dere04g1647 644 SUPERFAMILY Protein kinase-like (PK-like) 354 599 IPR011009 -
Dere04g1647 644 Coils Coil 590 610 - -
Dere04g1647 644 Coils Coil 285 305 - -
Dere04g1647 644 ProSiteProfiles Protein kinase domain profile. 341 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1647 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 45 607 IPR046959 -
Dere04g1647 644 MobiDBLite consensus disorder prediction 223 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1647 Dere-ChrDere04 18485688 18488188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1647 64 605 Receptor kinase-like Gene Family AT4G23740 29.848 3.33e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere04g1647 PK_Tyr_Ser-Thr 6.8e-24 CL0016