Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1636 ATGCCAGAAAGAGAAGTATGCAGTTTGATCAGAGAAACTCGTCCTGTGGTCAGGAAGTTCTTGGCCAGACCTCAACATGAAGGTGTTGGGGCTGTTGTTAGAAGAAGCATTGGACGGTTTGAGCTAAAGTACTTTGATCCATTCCTTGTCTTGGATGAATTCTCGGTCACTGCCCCTGCTGGCTTTCCTGATCATCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGTGCTGTAACGCATGAAGATTTTGAAGGACACAAGGGAACAATAGAAGCAGGTGATTTGCAGTGGATGACTGCAGGGAGAGGAATAGTTCACTCAGAGATGCCTGCAGCTCAAGGAACTCAGAAGGGCTTGCAGCTGTGGATCAACCTCTCTTCTGAATATAAAATGATTGAACCAAGGTATCAAGAAATGCTGAGTAAGGACATAGCAGAAGCCGCAAAAGATGGGATCAAGGTGAGAGTGATAGCAGGGGAAGCCTTAGGAATAAAGTCTCCAATCCAAACAAAGACTCCAACAATGTACTTGGACTTCTCTCTGAAGCCAGGATCTCACTTGCAGCAACCCATACCCAAGTCTTGGAATGCCTTTGCCTACGTGTTAGAAGGAGAGGGCGTGTTTGGGAACCCCAAATCTCAGCCTGTAACTTCGCACCACATTCTTCTTCTGGGTTCTGGGGATGGCTTGGAGGCATGGAACAAGTCCTCTAGTAAGGTGCTTAGGTTCATTCTGGTTGGGGGTGAGCCACTGGGTGAGCCTTTGGTGCAGTTTGGACCCTTTGTGATGAACACACAAGAAGAGATTGACCAGACCATTAGTGACTTTGAGAACTGTGTCAATGGGTTTGAGAAAGCTAGCCATTGGAGGTCTGAAGCTGCACTTGGTCTTGACTTCTAA 909 0.4697 MPEREVCSLIRETRPVVRKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSEYKMIEPRYQEMLSKDIAEAAKDGIKVRVIAGEALGIKSPIQTKTPTMYLDFSLKPGSHLQQPIPKSWNAFAYVLEGEGVFGNPKSQPVTSHHILLLGSGDGLEAWNKSSSKVLRFILVGGEPLGEPLVQFGPFVMNTQEEIDQTISDFENCVNGFEKASHWRSEAALGLDF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1636 302 SUPERFAMILY RmlC-like cupins 15 294 IPR011051 -
Dere04g1636 302 PANTHER PIRIN-RELATED 10 296 IPR012093 -
Dere04g1636 302 Gene3D Jelly Rolls 27 280 IPR014710 -
Dere04g1636 302 Pfam Pirin 33 126 IPR003829 -
Dere04g1636 302 CDD cupin_pirin_N 31 128 - -
Dere04g1636 302 PIRSF Pirin 12 293 IPR012093 -
Dere04g1636 302 FunFam pirin 27 164 - -
Dere04g1636 302 Pfam Pirin C-terminal cupin domain 179 284 IPR008778 -
Dere04g1636 302 CDD cupin_pirin_C 176 253 - -
Dere04g1636 302 Gene3D Jelly Rolls 148 254 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1636 Dere-ChrDere04 18367881 18371965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1636 14 289 Calmodulin-binding Proteins AT3G59220 58.484 3.75e-124 355