Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1603 ATGAGGAGGGGCAGAGGAGTCGCCGCTGTCAAGCCGGCGGCGGCGGCCGTTGAACTTGATGGATCCGGTCCAAGGACGATTTTAAAAGAGCCAAGGTACCGGGGCGTGAGGAAGAGACCGTGGGGTAGATTCGCCGCCGAGATCAGAGACCCCATGAAGAAAGCTCGTGTCTGGCTTGGTACCTTCGACTCCGCCGAGGAAGCGGCTCGAGCCTACGACGCTGCCGCTCGAGCCCTTCGTGGACCCAAGGCCAAGACCAATTTCCCTCTCTCCCCTTCTTCCCTCTCGCCGTTCTGCTACCACACCACGAACCCCAACGTCAACGACGACGTTTTGGATCACCGGTATTACGCCGCCGCGAACAGCGGTTTCCAAGAGCACCAGATTAATCCTCAGAGACCCGCCACCAGTAGCATGAGCAGCACATCCTACAGCGGGCCCCGGCCGCAGCCCACGGCGTTTCCGACGTCCGTAACCCGGAGATACCCTCGGACACCGCCGGTCATGCCGGAGGATTGTCATAGCGACTGCGATTCGTCGTCATCCGTGATCGACGGCGACTGTGATGGCGGCGATTTCGCTGCGTCGCCGTCGTCGTTCCGTCAACCGTTGCCTTTCGATCTCAACTTCCCACCGTTGGATGTTGCGAACGTGGCGGGCGATGATCTACAGTGTACCGCTCTCTGCCTCTGA 693 0.6075 MRRGRGVAAVKPAAAAVELDGSGPRTILKEPRYRGVRKRPWGRFAAEIRDPMKKARVWLGTFDSAEEAARAYDAAARALRGPKAKTNFPLSPSSLSPFCYHTTNPNVNDDVLDHRYYAAANSGFQEHQINPQRPATSSMSSTSYSGPRPQPTAFPTSVTRRYPRTPPVMPEDCHSDCDSSSSVIDGDCDGGDFAASPSSFRQPLPFDLNFPPLDVANVAGDDLQCTALCL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1603 230 FunFam Ethylene-responsive transcription factor 2 32 90 - -
Dere04g1603 230 CDD AP2 31 91 IPR001471 GO:0003700|GO:0006355
Dere04g1603 230 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 185 - -
Dere04g1603 230 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Dere04g1603 230 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Dere04g1603 230 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Dere04g1603 230 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Dere04g1603 230 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Dere04g1603 230 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Dere04g1603 230 MobiDBLite consensus disorder prediction 123 164 - -
Dere04g1603 230 MobiDBLite consensus disorder prediction 123 159 - -
Dere04g1603 230 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1603 Dere-ChrDere04 18047474 18048166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1603 1 230 AP2-EREBP Transcription Factor Family AT3G20310 59.289 7.77e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere04g1603 AP2 8.9e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1603 04 18047474 18048166 Dere04g1603 04 18047474 18048166 ECH