Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1591 ATGATACCGGGTAACGCTGTAGGTAATCCTCGTTCACCTCCGCAGAAGCATTTTCATGTTTTCTTGAGTTTCAGGGGAAAAAATACCCGCAGGAATTTTACCGACCACTTATATGCTGCATTGCTGCGGAAGGGAATTATAACTTTCAAGGATGACAAAGAACTTGAGAGAGGAGAAGTTATATCAGAGGAACTCATCAAAGCTATTGAGGGATCTATGTTTTCTATTATTGTTTTCTCCAAACACTATGCTTTTTCTTCATGGTGTTTGGATGAGCTGCAATATATTATGGAATGCAGAAAAGATTTGGGACAAATAGTTTTCCCAGTCTTTTATGCTGTACATCCCTCTGATATACGACAACAAAAGGGAAATGTTGGTAGAGCTTTTGAGAAACATGAAGGAAAATTTACAGAAGAAAAGGTGCAGAGATGGAGAGAAGCTTTAACTCTTGTTGGCAACTTAGTTGGTTGGGACACCAATAACCGGCATGAAGCAGATATCATTGAAGAAATCGTTGCAGTATTATGTACCCAACTTTATGTTAAATTGCCATCTAACTTTGACCATTTAGTTGGAATTCAATCAAAGGTAAACAAGATGATGTCCCTTTTAAAATTAGGGTTGGATGATAAATGCTTTGTTGGTATATGGGGAATGGGTGGAATAGGCAAGTCAACTCTTGCTAAAGTTGTTTATGAGACAATCAAAAGCAAATTTGAGAGTTCTTGCTTTCTTGCCAATATCAGGGAGGAATCAGAAAGAAGTGGTTTAGTTAACTTACAAAAGAAGCTTCTTTCTTGTCTTCTCCCAAAAAATAATGAAATCAATGATTCCTATGAAGGAGTGACTGCAGCGAGGCATCTTTTATGCAACAAAAAAGTTCTTATTATTCTTGATGATGGGTCAGAAAACGTTCAAAGTATAGTGTTGAATTTAAAACAAGAATATGAAGCAAATTGGCACCCGGATTGCTTCTCAAAGATGTGTAATCTTGTTTTGCTCTATTTGAGTAATGTGCATCTTTTGCATAGTCTCAATTCTCTTCCTAGTGCACTGAAAGTTCTCATATGGGAGGGATATCCTTTGAAAGCTATGCCACACAATATTGGCCAATTATATGAACTTGTGGAGCTCACATTGTGCCATAGCAAAATCAGACAACTCTGGAATGGAACACCAGTTTTAGGTAAGCTGAAGTTGATCAATCTGAGTTACTCTGAAGATCTAATTGAGACACCGGATCTCACTGGAGAGCTATCACTTCATGGATACAAAGGATCAGTTTTCTTGGGACTGAGGTTGCCCAATTCCTTCTCAGGATTCTCTAAATTGAGGAAATTAGGTTTGAGCTTCTGCAATCTGTGTGATGGATCAATGCCTGATGATTTAGGAGGCTTATCTTCATTGATAGAGCTTGATTTAAGGGGAAACCAATTTTCTGTCCTACCGTCTGACTCCATCTCTAATCTTCTCAAGCTTCAACGCCTTTACTTGAGTAATTGTGCTAGGCTTCAATCAATTCCCGAGCTTCCACCATATTTAATTAGAATATACGCAAGTTGCTGCCATGCATTGAAACCCTTAAAGAACGTCCAACATCTCATTGCGTCACTTGTCTCTAAGCGTCACAGTGATCTCTTACATGAAGTCATTTTCTTGCGTATAACGGGGGATGAAATCCCAACATGGTTTAAAGAACAAGACTGTCATGTACATCATGTTTCTCGGTTGCAGGCAAATATATCTATAACAGTAGACATGCCTTATGCTCGTGACAAGAGTAAATGGTGGGCAATTGCTGTATGCCTTGTGTTAAAGAAAAGAAAGTATTCTTTTTTCTGCATAGATCATCACTGGAGTTTCAAAGCTCCTGAAGATAAAGGCCCTTCCAAAGCGATGCAGAAATCTCTTTTTGGAGACGCGGATTCTGCCCCTCATCTTCATATAGCAATTCTTCCCTTTGATACTTTGAACTGTTGGCCACATCAACGAGGTGAACGGAACTCACAACTTCAATTGCAATTGAAAATTTATGGAGGTTTGGAAATAGTGAACTGTGCATGGCGTCTGATATGTAAGAAAGATTTTGATGTGAGGAGGTCAAGCAGTGGTTGTAGTAGCGTCCAGATTACAGAGCTTGACAATGACAAGCATGGCCGCCATCAATTTGAGGATGAATGTCCAAGTTGTACTACTAGCATTGATGCACAACGCAGAAAACCCCATTAA 2232 0.3902 MIPGNAVGNPRSPPQKHFHVFLSFRGKNTRRNFTDHLYAALLRKGIITFKDDKELERGEVISEELIKAIEGSMFSIIVFSKHYAFSSWCLDELQYIMECRKDLGQIVFPVFYAVHPSDIRQQKGNVGRAFEKHEGKFTEEKVQRWREALTLVGNLVGWDTNNRHEADIIEEIVAVLCTQLYVKLPSNFDHLVGIQSKVNKMMSLLKLGLDDKCFVGIWGMGGIGKSTLAKVVYETIKSKFESSCFLANIREESERSGLVNLQKKLLSCLLPKNNEINDSYEGVTAARHLLCNKKVLIILDDGSENVQSIVLNLKQEYEANWHPDCFSKMCNLVLLYLSNVHLLHSLNSLPSALKVLIWEGYPLKAMPHNIGQLYELVELTLCHSKIRQLWNGTPVLGKLKLINLSYSEDLIETPDLTGELSLHGYKGSVFLGLRLPNSFSGFSKLRKLGLSFCNLCDGSMPDDLGGLSSLIELDLRGNQFSVLPSDSISNLLKLQRLYLSNCARLQSIPELPPYLIRIYASCCHALKPLKNVQHLIASLVSKRHSDLLHEVIFLRITGDEIPTWFKEQDCHVHHVSRLQANISITVDMPYARDKSKWWAIAVCLVLKKRKYSFFCIDHHWSFKAPEDKGPSKAMQKSLFGDADSAPHLHIAILPFDTLNCWPHQRGERNSQLQLQLKIYGGLEIVNCAWRLICKKDFDVRRSSSGCSSVQITELDNDKHGRHQFEDECPSCTTSIDAQRRKPH 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1591 743 Gene3D - 181 333 IPR027417 -
Dere04g1591 743 Pfam NB-ARC domain 198 305 IPR002182 GO:0043531
Dere04g1591 743 ProSiteProfiles TIR domain profile. 16 180 IPR000157 GO:0007165
Dere04g1591 743 Gene3D - 15 180 IPR035897 -
Dere04g1591 743 SMART till_3 17 155 IPR000157 GO:0007165
Dere04g1591 743 SMART LRR_typ_2 467 490 IPR003591 -
Dere04g1591 743 SMART LRR_typ_2 373 396 IPR003591 -
Dere04g1591 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 305 IPR027417 -
Dere04g1591 743 PRINTS Disease resistance protein signature 289 303 - -
Dere04g1591 743 PRINTS Disease resistance protein signature 489 505 - -
Dere04g1591 743 PRINTS Disease resistance protein signature 214 229 - -
Dere04g1591 743 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 181 - -
Dere04g1591 743 Pfam TIR domain 18 193 IPR000157 GO:0007165
Dere04g1591 743 SUPERFAMILY L domain-like 310 535 - -
Dere04g1591 743 Gene3D Ribonuclease Inhibitor 396 547 IPR032675 -
Dere04g1591 743 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Dere04g1591 743 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 312 527 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1591 Dere-ChrDere04 17841549 17845396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1591 296 519 WRKY Transcription Factor Family AT4G12020 30.992 6.54e-15 77.4