Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1589 ATGGGAAAGAACATTGTTTTGCAAGAATCTCTAAAAGATGCTGGTAAATGCAGCAGACTGTGGTCTCTAGAAAACACCAATCAAGTGTTGGAAGGAAAAGAGGGGTCAGAAAACGTTCAAAGTATAGTGTTGAATTTAAAACAAGAATATGAGGCAAATTGGCACCCGGATTGCTTCTCAAAGATGTGTAATCTTGTTTTGCTCTATTTGAGTAATGTGCATCTTTTGCATAGTCTCAATTCTCTTCCTAGTGCACTGAAAGTTCTCATATGGGAGGGATATCCTTTGAAAGCTATGCCACACAATATTGGCCAATTATATGAACTTGTGGAGCTCACATTGTGCCATAGCAAAATCAGACAACTCTGGAATGGAACACCAGTTTTAGGTAAGCTGAAGTTGATCAATCTGAGTTACTCTGAAGATCTAATTGAGACACCGGATCTCACTGGAGTTCCAAACCTTGAATGTCTGCTCCTTGAAGGTTGCAGTAACCTGGTTATGGTTCATGAATCTGTTGGGCAGCTTAAGAAGCTAGTCAAGTTGGATTTGAAAGATTGCAAAAATCTTATAGCCCTTCCAAGTAAGTTGGAAATGAATTCTCTAAAGGAGCTTTTTCTTTCTGGATGCTCAAAACTCGAAAAGCTTCCAGATTTTGGGGAAAATATGAGAAGTCTATTTATTTGTGATGTGAGTGAAACCAATATAAGAGAAGTACCTTTGTCTATCATCCATTTGACAAATCTTAAGGAGCTATCACTTCATGGATACAAAGGATCAGTTTTCTTGGGACTGAGGTTGCCCAATTCCTTCTCAGGATTCTCTAAATTGAGGAAATTAGGTTTGAGCTTCTGCAATCTTTGTGATGGATCAATGCCTGATGATTTAGGAGGCTTATCTTCATTGATAGAGCTTGATTTAAGGGGAAACCAATTTTCTGTCCTACCGTCTGACTCCATCTCTAATCTTCTCAAGCTTCAACGCCTTTACTTGAGTAATTGTGCTAGGCTTCAATCAATTCCCGAGCTTCCACCATATTTAATTAGAATATACGCAAGTTGCTGCCATGCATTGAAACCCTTAAACAACGTGCAACATCTCATTGCGTCACTTGTCTCTAAGCGTCACAGTGATCTCTTACATGAAGTCATTTTCTTGCGTATAACGGGGGATGAAATCCCAACATGGTTTAAAGAACAAGACTGTCATGTACATCATGTTTCTCGGTGGCAGGCAAATATATCTATAACAGTAGACTTGCCTTATGCTCGTGACAAGAGTAAATGGTGGGCAATTGCTGTATGCCTTGTGTTAAAGAAAAGAAAGTATTCTTTTTTCTGCATAGATCATCATTGGAGTTTCAAAGCTCCTGAAGATAAAGGCCCTTCCAAAGCGATGCAGAAATCTCTTTTTGGAGACGCGGATTCTGCCCCTCATCTTCATATAGCAATTCTTCCCTTTGATACTTTGAACTGTTGGCCACATCAACGAGGTGAACGGAACTCACAACTTCAATTGCAATTGAAAATTTATGGAGGTTTGGAAATAGTGAACTGTGCATGGCGTCTGATATGTAAGAAAGATTTTGATGTGAGGAGGTCAAGCAGTGGTTGTAGTAGCGTCCAGATTACAGAGCTTGACAATGACAAGCATGGCCGCCATCAATTTGAGGATGAATGTCCAAGTTGTACTACTAGCATTGATGCACAACGCAGAAAACCCCATTAA 1728 0.397 MGKNIVLQESLKDAGKCSRLWSLENTNQVLEGKEGSENVQSIVLNLKQEYEANWHPDCFSKMCNLVLLYLSNVHLLHSLNSLPSALKVLIWEGYPLKAMPHNIGQLYELVELTLCHSKIRQLWNGTPVLGKLKLINLSYSEDLIETPDLTGVPNLECLLLEGCSNLVMVHESVGQLKKLVKLDLKDCKNLIALPSKLEMNSLKELFLSGCSKLEKLPDFGENMRSLFICDVSETNIREVPLSIIHLTNLKELSLHGYKGSVFLGLRLPNSFSGFSKLRKLGLSFCNLCDGSMPDDLGGLSSLIELDLRGNQFSVLPSDSISNLLKLQRLYLSNCARLQSIPELPPYLIRIYASCCHALKPLNNVQHLIASLVSKRHSDLLHEVIFLRITGDEIPTWFKEQDCHVHHVSRWQANISITVDLPYARDKSKWWAIAVCLVLKKRKYSFFCIDHHWSFKAPEDKGPSKAMQKSLFGDADSAPHLHIAILPFDTLNCWPHQRGERNSQLQLQLKIYGGLEIVNCAWRLICKKDFDVRRSSSGCSSVQITELDNDKHGRHQFEDECPSCTTSIDAQRRKPH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1589 575 SMART LRR_typ_2 299 322 IPR003591 -
Dere04g1589 575 SMART LRR_typ_2 106 129 IPR003591 -
Dere04g1589 575 Pfam Leucine Rich Repeat 109 126 IPR011713 -
Dere04g1589 575 SUPERFAMILY L domain-like 43 363 - -
Dere04g1589 575 Gene3D Ribonuclease Inhibitor 229 417 IPR032675 -
Dere04g1589 575 Gene3D Ribonuclease Inhibitor 37 220 IPR032675 -
Dere04g1589 575 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 223 359 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1589 Dere-ChrDere04 17719773 17721790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1589 2 336 WRKY Transcription Factor Family AT4G12020 36.648 1.81e-39 153