Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1587 ATGTTAAATAGGAAAAACTTCAAGAACTCATTTTTTTTCAAAAAAAATGAGACGGCCACCGTCCACCGAACCACCACCATTCACCGAAAGAGCAAGAGTGGAGGTCAGTCAATAAAGGTAGATTGTGCATTTGGTGGAGTGAAGAGAGGTGGGTCACGTCAAAACTCAAAATCAAAGCTATTTGATTCATCTTCTTCCATTACCGAGAATTCAAGCTCAGAAGATTCATTTTCTCCCAGTTTGCCCAGAGGCCCTTCAATGGCACTGACTTGCGCCAACGATGATTCTTCCTCCACTTTCGCGGCCTCTTCAATCCCACGTTGGAATTATCATGTTTTCTTGAGTTTCAGAGGAGAAGACACTCGCAGAAACTTTGCTGATCACTTATACGCTGCATTGCAGCGAAAGGGAATTGTGACTTTTAGGGACGACGAAGAACTTGAGAGAGGAGAAGTTATTTCGGAGAAACTCATGAAAGCCATTGAAGAATCGTTGTTTGTTGTTGTCATTCTCTCTCAGGACTATGCTTCTTCTTCGTGGTGTTTGAATGAGCTGCAAAAAATCGTTGAATCCAGAAGAAACATGGGCCGAACAGTTTTTCCAGTTTTTTATGGTGTGGATCCGTCTGATATTCGACAGCAGAAGGGAATAATTAGGCGAGCTTTTGAGGAACATGAAGGAAAATTTGCAGAAGATAAGGTGCGAAGATGGAGAAGAGCTTTAACAGATGTTGCCGACATTGCTGGTTGGGATACTAGAAATAAGCATGAAGCAGGAATCGTTGAAAGCATTGCTGCAGCAATATGGACTAAATTACGTGTTAAATTGCCATCTAATTTTGCTCATTTAGTTGGGATTCAATCAAAGGTAGACAAATTGGTCTCGCTTTTAAAGATCGGGTTGGACCATAAATGTTTTATAGGGATATGGGGCATGGGCGGCATAGGTAAAACAACTCTTGCAAGAATCGTTTATGATGAAATCCGAAGCAAATTTGAAAACAGTTGTTTCCTTGCCAACGTTAGGGAGGATTCTGAAAATAATGGTTTAGTCTACTTACAAAAGAAGCTTCTTTCATGTTTCAACCAAAAAAACATTGAAATCAATGATTCCTACGACGGAGTGGAGGCAATAAGAAACTTTTCATGCAATACCAAGGTTCTCATTGTTCTTGATGATGTTAGTCATATAAGCCAACTTCAGAATTTGGCTGGAAATAGAGAGTGGTTTGGTGATGGAAGTAGAATAATAATAACTACAAGAGATATACACCTGTTGACAGCACATGATCAGTTTGAAAAGTACGAAATGAAGACATTAGCAAGAGGTGAATCCCTTAAGCTCTTGTGTCAGCATGCATTTAAAATGGATTATCCTCAAGAAGGATTCTGGGAATTGTCAAAAAAAGTGGTTGAATATGCTTCTGGTCTTCCCCTGGCACTTCAAGTGTTGGGTTCGTTTCTTTGTAAAAGAAGTCGATCTGAATGGAGAGATATGCTAGATAAGTTGAAGCAAAATTTACATAAGGATATTTTCAAGACGCTTCGCATAAGTTATGATGGATTAGATGATGAAGAGTATAAAACAATATTTTTGGATATTGCATGTTTTTTCAACAGGAAGAGAAAAGCTGAAGTGACAAGTATATTGGAAAGGTGTGGTCTTCATGCAACAATTGGAATCAAACTTCTTATTGAAAAATCATTGCTAAGTCACATTACATGGGGAGGCAGCGAAGGATTTCTATATATGCATGATTTGCTCCGAGAGATGGGAAAAAACATTGTTTTGCAAGACTCTCATTATGATGCTTGCAGATGCAGCAGGTTATGGTCTCAAGAGCATATTGATCTAGTTTTCGCAAGAAGTAAGGGAACCGAAAGAGTTCAAGGTGTAGTTTTGAATTCAAAACAACCATATGAGGCAAATTGGCACCCGGATTGTTTCTCAAAGATGTGTAATCTTAGATTACTCTACTTAAGTAATGTGCATCTTTTGCATAATCTCAATTCTCTTCCTAGTGCACTGAAAGTTTTGATATGGGAGAAATATCCTTTGCAAGCTTTGCCAAGCAATGTTAACCAATTATATGAACTTGTGGAGCTTACTTTGCATCGTAGCAAAATTAGAAAACTCTGGAATGGAAGACCGTTTTTAGGTAAGTTGAAGTTCATGGATTTGAGTTACTCTAGAGATCTCACTGAAACGCCAGATTTAAGGGGTGCTCCGAACCTTGAAAGATTGTTCCTTGATCGTTGCATAAATCTAGTTAAGGTTCATGAATCTCTTGGGCAGCTCAAGAAGCTAGTGAAGTTGAGTTTGAGAGGTTGTGAAAGTCTTGTGACCCTTCCAAGGAAATTGGAATTGAACTCTCTAGAGGAGTTTTTCCTTTCTGGATGCTCAAAACTTGGGAAGCTTCCTGAATTTGGAGAAAATATGAAATGTCTATCCATCTTTGATCTCAGTGGAACTAACATAAGAAAAGTTCCTTCTTCCATCGTTCATTTAACAAATCTCAAAGAGCTATCTCTTCGGGGATGCAACTGGCAAGCTTGGAATTCATGGAGCTTCTTTGGCTACTTTGGTCGTTTGATATGTCGATTTACAGGGACTCCAATGGGGTTGAAGCTGCCCAATTCTTTCTCAGGTCTCTCCTCGTTGAGGAAACTGGACTTAAGTTTCAGCAATCTTTATGATGGATCAATCCCTAATGATTTAAGTGGCTTATCATCATTGATGGATTTGAATCTAAGGGGAAACCATTTTGCTGCCCTACCTGTTCACTGCTTCTCCAAGCTTCTAAATCTTGAACGTTTTGACTTGAGTAATTGTCTTGAACTTCAGTCAATTCCTGAGCTTCCTCCTAATTTAATGAGAGTATACGCAGGTTGTTGTCCTTGTATTGAACCCTTATTGGATGTGCAACATCTCTTGGCATCTCTACTTGTCAGTAAGCGACGCAGTCTTCTTCTACATGAAGTTATTTTCTTGCATATATCAGGGGATATAATCCCAATTACATGGTTTAAAGAGCAGAAATATTTCGTTGATCCGCTTGGAGCCAGTGTGTCTATGGTAGTAGACATCCCTTACATTCATAATATGAGTACTGAATGGTGGGGAATTGCTGTATGCCTGATGGTAAAAAGCAAGAAGGCTTTGTTTTATTGTTCAAATTCCAAAATTTATTGGAGGTTCAAAGCTCTTGAAGATGAAAGCTTTGATGAACCAGAACAGAAATTTTATATTGGGAAAGCATATTCAATCCCTCATCTATATATAGCAATTTTCCCCTTAAATACTCAGAACTGTTGGCGACATCTAAGAGGCGAACGCCACCAACTTGAACTGCTAATTAGGGTTGAAAGAGAATTCAACATAAAGGATTGTGGTTGGCGTCTTGTATGCAAGAAAGATTTTGACGTATGTAATGCAAGTGTTGCCCCTAATAGCCTTCACATTAAACGGCTTGCCAACAAAAACTGA 3486 0.3893 MLNRKNFKNSFFFKKNETATVHRTTTIHRKSKSGGQSIKVDCAFGGVKRGGSRQNSKSKLFDSSSSITENSSSEDSFSPSLPRGPSMALTCANDDSSSTFAASSIPRWNYHVFLSFRGEDTRRNFADHLYAALQRKGIVTFRDDEELERGEVISEKLMKAIEESLFVVVILSQDYASSSWCLNELQKIVESRRNMGRTVFPVFYGVDPSDIRQQKGIIRRAFEEHEGKFAEDKVRRWRRALTDVADIAGWDTRNKHEAGIVESIAAAIWTKLRVKLPSNFAHLVGIQSKVDKLVSLLKIGLDHKCFIGIWGMGGIGKTTLARIVYDEIRSKFENSCFLANVREDSENNGLVYLQKKLLSCFNQKNIEINDSYDGVEAIRNFSCNTKVLIVLDDVSHISQLQNLAGNREWFGDGSRIIITTRDIHLLTAHDQFEKYEMKTLARGESLKLLCQHAFKMDYPQEGFWELSKKVVEYASGLPLALQVLGSFLCKRSRSEWRDMLDKLKQNLHKDIFKTLRISYDGLDDEEYKTIFLDIACFFNRKRKAEVTSILERCGLHATIGIKLLIEKSLLSHITWGGSEGFLYMHDLLREMGKNIVLQDSHYDACRCSRLWSQEHIDLVFARSKGTERVQGVVLNSKQPYEANWHPDCFSKMCNLRLLYLSNVHLLHNLNSLPSALKVLIWEKYPLQALPSNVNQLYELVELTLHRSKIRKLWNGRPFLGKLKFMDLSYSRDLTETPDLRGAPNLERLFLDRCINLVKVHESLGQLKKLVKLSLRGCESLVTLPRKLELNSLEEFFLSGCSKLGKLPEFGENMKCLSIFDLSGTNIRKVPSSIVHLTNLKELSLRGCNWQAWNSWSFFGYFGRLICRFTGTPMGLKLPNSFSGLSSLRKLDLSFSNLYDGSIPNDLSGLSSLMDLNLRGNHFAALPVHCFSKLLNLERFDLSNCLELQSIPELPPNLMRVYAGCCPCIEPLLDVQHLLASLLVSKRRSLLLHEVIFLHISGDIIPITWFKEQKYFVDPLGASVSMVVDIPYIHNMSTEWWGIAVCLMVKSKKALFYCSNSKIYWRFKALEDESFDEPEQKFYIGKAYSIPHLYIAIFPLNTQNCWRHLRGERHQLELLIRVEREFNIKDCGWRLVCKKDFDVCNASVAPNSLHIKRLANKN 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1587 1161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 110 848 IPR044974 GO:0006952
Dere04g1587 1161 MobiDBLite consensus disorder prediction 51 80 - -
Dere04g1587 1161 Gene3D - 273 434 IPR027417 -
Dere04g1587 1161 Gene3D Ribonuclease Inhibitor 641 812 IPR032675 -
Dere04g1587 1161 SMART LRR_typ_2 696 717 IPR003591 -
Dere04g1587 1161 SMART LRR_typ_2 884 908 IPR003591 -
Dere04g1587 1161 SMART LRR_typ_2 813 836 IPR003591 -
Dere04g1587 1161 SMART LRR_typ_2 909 932 IPR003591 -
Dere04g1587 1161 SMART till_3 109 247 IPR000157 GO:0007165
Dere04g1587 1161 MobiDBLite consensus disorder prediction 48 83 - -
Dere04g1587 1161 FunFam Disease resistance protein (TIR-NBS-LRR class) 441 523 - -
Dere04g1587 1161 Pfam TIR domain 109 285 IPR000157 GO:0007165
Dere04g1587 1161 Gene3D - 107 272 IPR035897 -
Dere04g1587 1161 PRINTS Disease resistance protein signature 764 780 - -
Dere04g1587 1161 PRINTS Disease resistance protein signature 381 395 - -
Dere04g1587 1161 PRINTS Disease resistance protein signature 306 321 - -
Dere04g1587 1161 PRINTS Disease resistance protein signature 474 488 - -
Dere04g1587 1161 SUPERFAMILY "Winged helix" DNA-binding domain 510 617 IPR036390 -
Dere04g1587 1161 Pfam NB-ARC domain 288 516 IPR002182 GO:0043531
Dere04g1587 1161 Gene3D Ribonuclease Inhibitor 813 970 IPR032675 -
Dere04g1587 1161 FunFam Disease resistance protein (TIR-NBS-LRR class) 106 274 - -
Dere04g1587 1161 Gene3D - 439 523 IPR042197 -
Dere04g1587 1161 SUPERFAMILY L domain-like 641 970 - -
Dere04g1587 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 272 534 IPR027417 -
Dere04g1587 1161 SUPERFAMILY Toll/Interleukin receptor TIR domain 103 250 IPR035897 -
Dere04g1587 1161 ProSiteProfiles TIR domain profile. 108 276 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1587 Dere-ChrDere04 17690699 17696460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1587 106 915 WRKY Transcription Factor Family AT4G12020 31.818 1.53e-95 334