Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1574 ATGGAAGCCACCTGCAGTACTGATCCCATAGGCAACTCAAATTCTGAGCATTCTTCTCCGATCATTTCCTTCAACGGGAAACGGCTAGTCGTAGATGAGATGGATTTCTTCGCAGAGAATTTGAAGATGAATAAGGCTGAACATGATGACGACGATGATCAGATGCTGAACAGAATAGAGCTCCACGTAGATACTAGTTTAGATCTTCTTTCGAAGAATATCAGTAGCAGCAGATCGATTGTGGATGATGATAGGGCATCAGAGACCGTGGATGATAATAAGAGAAATGAGGCACGTCTGTTTGCAGCTCTGGAAGCTGAATTGTTCCAGATGAATGCTGAAAATCAACGTTTAAGAGAGATGGTTGATCAGGCTAACGATAACTACAATGCCCTGCATATGCAACTTATCAGGCTGATGCAGAACCAACAGCATGATGATAATGGGGTAAAAGAAGCCTCAGATGAGAAGAGAAGGAAAGGAAGTATGGTTCCAAGGCAATTCATAGAAATGGGTGCTGCTGAAAAAGATGAATCTCATTATTCGCAGCAATGTTCAGAAGGAATAAAATTGCAGGAAAGGAAAAGCAATATGGTTGAGATGATGGATCAGTATCAAGATCTTCAGTATAGTAAGATAGATAGTAATAGTAAGTGTCACAGTACCAACATAGCCAGAAGGGATAATATTATTGAAGAGAGGCCAGATCATCATAAGAATCAGGAAGCTATAGTCCCTGGTTGGCTTTCCAATCAACTAAGTTCTTCCAAGAGTGATGTTGATCAAAACTCTGAAACCTTGTCAATGATCAAGAAAGCTCGTGTTTCTGTTCGAGCAAGATCAGAGTCCCCAATGATTTCTGATGGATGCCAATGGAGAAAGTATGGGCAGAAGATGGCAAAAGGAAATCCATGTCCTCGAGCTTATTATCGTTGCACCATGGGAGCTGGTTGCCCAGTACGAAAACAGGTACAAAGGTGTGCTGAAGATCAAACTGTGCTAATCACAACATACGAAGGGCAGCACAACCACCCACTCCCTCCCACCGCCAAGGCCATGGCATCCACCACCTCCGCAGCTGCCTCAACGCTTCTCTCGGGATCCATGCCGAGTGGGGATCACGGTGGCACCGGCACCATGATGAACCTGAACATTCTAGAAGGTGTGCAATGCTCACACAACTTTGCAACCCTCTCAGCCTCAGCTCCATTTCCAACCATCACATTGGATCTCACGGTTCAAAGCACTTCCAGTTCCAGCATTTCCTCACAGACACAAGTTAACATGCTGCCTCCAAGCATCTTTGGGCAGTCTCTAGTGTGTGACAAAACCAAGTTCTCTGGACTACACCTTAGTGGGGCCGGGGCCCAGGGAAACAGTCTTGAAGGTACGACGTCGTTTGCTGACACTGTGAATGCTGCAACTGCTGCTATTACTGCAGACCCTAATTTCACTGCTGCTCTTGTGGCTGCAGTGACGTCTATCATTGGGAATTCATATTCCAACAATGGTGGTAACAATAATACGTAG 1530 0.4503 MEATCSTDPIGNSNSEHSSPIISFNGKRLVVDEMDFFAENLKMNKAEHDDDDDQMLNRIELHVDTSLDLLSKNISSSRSIVDDDRASETVDDNKRNEARLFAALEAELFQMNAENQRLREMVDQANDNYNALHMQLIRLMQNQQHDDNGVKEASDEKRRKGSMVPRQFIEMGAAEKDESHYSQQCSEGIKLQERKSNMVEMMDQYQDLQYSKIDSNSKCHSTNIARRDNIIEERPDHHKNQEAIVPGWLSNQLSSSKSDVDQNSETLSMIKKARVSVRARSESPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMGAGCPVRKQVQRCAEDQTVLITTYEGQHNHPLPPTAKAMASTTSAAASTLLSGSMPSGDHGGTGTMMNLNILEGVQCSHNFATLSASAPFPTITLDLTVQSTSSSSISSQTQVNMLPPSIFGQSLVCDKTKFSGLHLSGAGAQGNSLEGTTSFADTVNAATAAITADPNFTAALVAAVTSIIGNSYSNNGGNNNT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1574 509 MobiDBLite consensus disorder prediction 1 21 - -
Dere04g1574 509 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1574 509 ProSiteProfiles WRKY domain profile. 281 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1574 509 Gene3D WRKY domain 271 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g1574 509 Coils Coil 101 142 - -
Dere04g1574 509 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 67 504 IPR044810 GO:0003700
Dere04g1574 509 FunFam probable WRKY transcription factor 31 271 348 - -
Dere04g1574 509 SUPERFAMILY WRKY DNA-binding domain 279 347 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g1574 509 SMART WRKY_cls 286 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1574 Dere-ChrDere04 17510029 17514247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1574 22 508 WRKY Transcription Factor Family AT1G62300 40.866 4.42e-101 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere04g1574 WRKY 3.4e-24 CL0274