Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1564 ATGAGTTTTGTATTTCGAGGAACAAGGGCAGATATAGAAAGTGGGTTTTCAGGATTTAGACCTGAGAGGCGTATACAGCATGTTCTTGCAGAGCGTCGTCGAAATTCCAGTTCACTCACTTTTCTTGTCACAGTCCTCTTGCTATTTATGATACTAAATTCTCACCAGATGTCACCAAATTTTCTGCTCTGGCTAGTGCTTGGTGTCTTCTTGATGGCTACAATGTTAAGGATGTATGCAACTTGTCAACAGCTTCAAGCACAGGCCCAAGCTCATGCAGCGACAGCCAGTGGCCTTTTTGGCCACACTGAACTGCGGTTGCATATGCCACCTTCAATAGCACTTGCAACTCGAGGGCGTTTACAAGGCCTCAGACTTCAGCTTGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCAGATAATATTCCCACTGCACCTTCCATGACTGAGGAAGAGATAAATGCTCTTCCTGTTCACAAGTACAAGGTTGCTGGTTCCCAAAACAGTGGTTCCTTGATGCAACAGGCCTCATCTTCTACATCTGCTGAGAAGAAGCAAGATACCTCAAATCCAGTTGGGAGCATGAAAGCCTCTGATGATGAGCTGACTTGCAGTGTTTGTTTGGAGCAAGTAAATGTTGGAGATATACTCCGTAGCTTGCCTTGCTTGCACCAGTTTCATGCTAATTGCATTGATCCCTGGCTGCGGCAACAAGGAACTTGTCCTGTCTGTAAATTTAGAGCTGGATCTGGATGGCAAGAAACTGGAGTCAATGAAGTCAATGCTTCAGACATAGTTTGA 828 0.4457 MSFVFRGTRADIESGFSGFRPERRIQHVLAERRRNSSSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAATASGLFGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNIPTAPSMTEEEINALPVHKYKVAGSQNSGSLMQQASSSTSAEKKQDTSNPVGSMKASDDELTCSVCLEQVNVGDILRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWQETGVNEVNASDIV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1564 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 259 IPR013083 -
Dere04g1564 275 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Dere04g1564 275 PANTHER TARGET OF ERK KINASE MPK-1 1 261 - -
Dere04g1564 275 MobiDBLite consensus disorder prediction 178 206 - -
Dere04g1564 275 CDD RING-H2_PA-TM-RING 212 254 - -
Dere04g1564 275 SMART ring_2 213 253 IPR001841 -
Dere04g1564 275 MobiDBLite consensus disorder prediction 178 205 - -
Dere04g1564 275 Pfam Ring finger domain 212 254 IPR001841 -
Dere04g1564 275 SUPERFAMILY RING/U-box 208 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1564 Dere-ChrDere04 17319186 17322537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1564 1 275 C3H Transcription Factor Family AT3G55530 77.536 2.33e-144 404