Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1552 ATGATAAACGAAAAGAAAAAACCCACGTTTTCCTTCATAACCCGCATCCTGGAATCCACTGCCCTGTTTCGCTTACCTTTCTCTGCCTCAAACAATAAAAAGAAGGATGTAACACCAGCATCCCAGTTTCTTCAGACATTTTCCGACCAATTCTTCCACGTTGGCCCCATCATGGAGAAAACACTCATGCTTCTCTGCTTCTTCATTCTGACCTTCAACCCTGTTGAATCTCAGCACGACGAGCTCTTCTTTGAAGGGTTTCGCGGTGCTGGCAGCAACGTCAGCTTAAACGGAGGTGCAGAGATCGAAAAGAATGGTATACTCTGCTTAACAAACAACACGCTTAGAGTACTTGGGCATGCGTTTTACTCATCGCCAATCCGGTTCAAGAGGACAAACGACGGTAAAGTTTCCTCCTTTTCCACCTCTTTCGCTTTCGCAATAATTCCAGAGTATCCCAAATTGGGTGGCCATGGCTTCGCCTTCACGATTTCTCGCTCGAAAGAGCTTCCCGGTGCCTATCCTAGCCAGTATTTAGGCCTTCTGAATTCAAACAATGATGGGAATTTCTCGAACCACCTGTTCGCTGTGGAGTTTGACACTGTCCAGGACTTAGAATTCCGGGACATCAATGATAACCATGTGGGTATCGACCTGAACCACATGATATCCAACAAGTCTGTTCAAGCTGACCTCAATTTGAAGAGTGGTGAGGTCATTCAGTCTTGGGTTGACTACGATTCCTCTAAGAATCAATTGGAAGTTAGACTTTCTTCATCTTCTTCAAAACCCACTTCCCCAATTTTGTCTTTTGAAGTGGACCTCTCACGAATTCTTGAAGAAACCATGTATGTGGGATTTTCTGCTTCAACTGGGTTGCTTGCGAGCCAACACTACATCCTGGGTTGGAGCTTCAAGATCGATGGAGAGGCAGAGTCTCTGAATTTGGAAACATTGCCCTCACTCCCTGCGTCTAAGAAGAGTCAAAAGGCCTTAATCGTGGGAGTCTCTCTTTCAGCTGCTTTTTTTTTAACTGGAGCAATTGTTTTAGCAGTATATCTTGTTCGAAAGATAAAGTATGATGATGTTATTGAAGCTTGGGAGCTTGATGTTGGTCCTCACAGATTCCCATACCAGCAGCTAAAAGAAGCGACAAAGGGCTTCAAAGACAAACAGCTACTCGGGTTTGGTGGGTTTGGTCGAGTTTACAAAGGGGTTTTACCAAATTCTAATTCCCAAGTCGCTGTGAAGCGAATTTCCCATGAATCAAAACAGGGTTTACCAGAATTCGTGTCTGAAATAGCCACCATTGGTCGGCTTCGTCATAGAAACCTGGTTCAATTACTAGGTTGGTGTCGAAGGCGTGGTGATTTATTACTAGTATATGATTATATGCCCTATGGGAGCCTAGACAAGTACCTCTTCGACGAACCCAAAGCAATACTGAGCTGGGAACAGAGGTTCAAGATCATAAAGGGCGTGGCTTCGGGTCTTCTATATTTACATGAGGAATGGGAAAAAACTGTGATTCACAGAGACATCAAAGCAGGAAATGTTCTATTGGATTCGGAAATGAATGCCAGGCTTGGTGACTTCGGGTTAGCCAAGCTGTATGAACACGGGTCGAATCCAAGCACCACCCGAGTGGTGGGCACACTGGGTTATTTGGCACCGGAGCTCACGCGCACAGGGAAACCCACAAAAAGCTCCGACATTTTTGCGTTCGGTGCTCTGTTACTCGAAGTGGCATGCGGGAGAAGACCCATTGAGTCCAAGGCGTTGCCGGAGGAGCTCATATTGGTGGACTGGGTCTGGGATCGGTGGCGGGTCGGTTCAGTACTTGACGTGATTGACCCGAAATTGGGAGGTGAATTTGGTGAGCTACAGGCCGTGGTGGTGCTTAAACTGGCTTTGATGTGCTCGAATGATTCGCCGCAAGCTCGACCCGGTATGAGACAGGTGGTTAGATACTTGGAGGGGGAGGCGGTGCTGCCGGAGTTGGTGCCGGCGCCGGACGCTTTTGCTGGGAAAAAGAAGGGTGCAGTAGGAGGTGGCAGTGGTGATGGTATTGGTGACTTTGAAGATTTTGTGCATTCTTATCCAACGACGTCGTTTTTTGACCGGGCTAGTACATGGTCGTCGGCCGGTGATGACGGGTACGTTGACATTGAGGCTGGCTCTGCTTCGCCTCTCTCCCTTTCCAGTAGAAGGGAGGGCAGGTAG 2223 0.4755 MINEKKKPTFSFITRILESTALFRLPFSASNNKKKDVTPASQFLQTFSDQFFHVGPIMEKTLMLLCFFILTFNPVESQHDELFFEGFRGAGSNVSLNGGAEIEKNGILCLTNNTLRVLGHAFYSSPIRFKRTNDGKVSSFSTSFAFAIIPEYPKLGGHGFAFTISRSKELPGAYPSQYLGLLNSNNDGNFSNHLFAVEFDTVQDLEFRDINDNHVGIDLNHMISNKSVQADLNLKSGEVIQSWVDYDSSKNQLEVRLSSSSSKPTSPILSFEVDLSRILEETMYVGFSASTGLLASQHYILGWSFKIDGEAESLNLETLPSLPASKKSQKALIVGVSLSAAFFLTGAIVLAVYLVRKIKYDDVIEAWELDVGPHRFPYQQLKEATKGFKDKQLLGFGGFGRVYKGVLPNSNSQVAVKRISHESKQGLPEFVSEIATIGRLRHRNLVQLLGWCRRRGDLLLVYDYMPYGSLDKYLFDEPKAILSWEQRFKIIKGVASGLLYLHEEWEKTVIHRDIKAGNVLLDSEMNARLGDFGLAKLYEHGSNPSTTRVVGTLGYLAPELTRTGKPTKSSDIFAFGALLLEVACGRRPIESKALPEELILVDWVWDRWRVGSVLDVIDPKLGGEFGELQAVVVLKLALMCSNDSPQARPGMRQVVRYLEGEAVLPELVPAPDAFAGKKKGAVGGGSGDGIGDFEDFVHSYPTTSFFDRASTWSSAGDDGYVDIEAGSASPLSLSSRREGR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1552 740 CDD lectin_legume_LecRK_Arcelin_ConA 84 309 IPR001220 GO:0030246
Dere04g1552 740 SUPERFAMILY Protein kinase-like (PK-like) 369 667 IPR011009 -
Dere04g1552 740 ProSiteProfiles Protein kinase domain profile. 388 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1552 740 SMART serkin_6 388 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1552 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 509 521 IPR008271 GO:0004672|GO:0006468
Dere04g1552 740 FunFam L-type lectin-domain containing receptor kinase S.4 465 671 - -
Dere04g1552 740 PANTHER - 74 669 - -
Dere04g1552 740 SUPERFAMILY Concanavalin A-like lectins/glucanases 83 324 IPR013320 -
Dere04g1552 740 CDD STKc_IRAK 394 660 - -
Dere04g1552 740 FunFam Lectin-domain containing receptor kinase A4.3 373 464 - -
Dere04g1552 740 FunFam L-type lectin-domain containing receptor kinase S.4 78 313 - -
Dere04g1552 740 Pfam Protein kinase domain 388 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1552 740 ProSitePatterns Protein kinases ATP-binding region signature. 394 417 IPR017441 GO:0005524
Dere04g1552 740 Gene3D Phosphorylase Kinase; domain 1 373 464 - -
Dere04g1552 740 Gene3D - 81 309 - -
Dere04g1552 740 Pfam Legume lectin domain 83 319 IPR001220 GO:0030246
Dere04g1552 740 Gene3D Transferase(Phosphotransferase) domain 1 465 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1552 Dere-ChrDere04 17241192 17243414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1552 75 699 Receptor kinase-like Gene Family AT3G55550 61.934 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere04g1552 Pkinase 1e-46 CL0016