Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1549 ATGGCTATATATACGAGCCTGTATTTGTCTCTTTGGGCTGAACGAGTCAGAATTGAACACTATGGGAATAATGCAGATTACAGACATACTAGCACAACCTCTAAACATATACACAAATACAAACCAAGGACAATAATGACAGGGTGTGGCTCTTCATGTGGAGCATGCAAGTTCCTGAGGAGAAAGTGCACGATTGATTGTGTCTTTGCTCCTTACTTCTCCTATGACCAGGCTGCAACCCATTTTGCTGCAGTTCACAAGGTTTTCGGGGCTAGCAATGTTTCGAGGCTACTGTCACACCTACCAGTTCATAACAGAAGCGATGCTGCCATAACCATATCTTACGAAGCTCTGGCTCGGGTTCATGATCCCATCTATGGTTGTGTTGCTCATATATTTGCCCTGCAGCAACAGGTTGCTAGCTTGCAAGAGGAGATAGATATTCTTAGTGTGATGGCGAATTATAGTGTTGGTGTTGCTGATTTTGGAAGTTCTTTAGTACCATCAAACTCAAACAACGGGATGGACTTCTCTTTACAGCACGATGCCACAAGAATACAAAGTTATCAAGAACCATTGGCTAATCTACTTTCTCAAGAAGGAAGTGCCGAAGTGTACCAAAGCTTGGACGGACACAGACAGATGGACTTTGAGTTTACTAAGAATGAGCATGGATTGGAAGACCATTTATTTGGCGAGTCCAACCTTAATTCATTGGAGAAGCTCCTCTGCGAAATTGAACAAGAGGCCTTTCTGAATCATCCATGGTTTACCCACGCCTGA 783 0.433 MAIYTSLYLSLWAERVRIEHYGNNADYRHTSTTSKHIHKYKPRTIMTGCGSSCGACKFLRRKCTIDCVFAPYFSYDQAATHFAAVHKVFGASNVSRLLSHLPVHNRSDAAITISYEALARVHDPIYGCVAHIFALQQQVASLQEEIDILSVMANYSVGVADFGSSLVPSNSNNGMDFSLQHDATRIQSYQEPLANLLSQEGSAEVYQSLDGHRQMDFEFTKNEHGLEDHLFGESNLNSLEKLLCEIEQEAFLNHPWFTHA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1549 260 ProSiteProfiles LOB domain profile. 51 153 IPR004883 -
Dere04g1549 260 PANTHER LOB DOMAIN CONTAINING PROTEIN 46 196 - -
Dere04g1549 260 Pfam Lateral organ boundaries (LOB) domain 52 148 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1549 Dere-ChrDere04 17202179 17204100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1549 46 229 AS2 family AT5G06080 54.054 1.91e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere04g1549 LOB 1.3e-35 No_clan