Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1535 ATGGCTGGGATTTGCTGCGGTGTCGTTGGAGAAGGAGAGACGCTTCCTCCTATTGATCCCACCTCACGACCTTCTAGGCGCCGGAGGTTGGACCCGGTGCCCTTGAAGTATATAGCGGACATGGCTGTACCGCCACCGGAGGGTAGCCGGAAGCTCCAGAAGCGGGATTTCTGTTCTGCTTCGACCGAGCGTCGAGAGTGCAAAATCGCAGTGGATAATAGTGAATCGAGCGGTGAGAAGCACGTGGAGGAGGAGCATAAGAAAGAATCGCAGATAGATGAAGTTTCTCTTACGGTTAATTCGACAATTCCTTCCTCAAATTTCTCGATGACGGAGCTAGAGGAGGAGATTATTCAGAACTGTCCGAAGTTTGGCGTAACATCTGTTTGCGGAAGGAGAAGGGATATGGAAGACGCAGTGTCAGTTTATCCTGCATTCTGCCAAGAACAAGAATATCATTTCTTCGGGGTATTCGACGGCCATGGATGCTCTCATGTAGCAACGATGTGTAAAGACAGGTTACATGAGATTGTGAAGGAGGAAATTGGTGGTGCCCGAGATTATTTGGAATGGCAACCTGTGATGGAACAGAGTTTTGCTCGCGTGGACGAGGAGGTGCAGACCTGGAACCAGAGTAACCAGAGCTCCAGTTGCAGGTGCGAGCTCCAGACTCCTCACTGCGACGCCGTTGGATCTACCGCCGTTGTTGCCGTTGTAACGCCAGACAAGGTCATCGTCTCCAACTGCGGCGATTCACGCGCGGTCCTCTGCCGAAACGGCGTCGCCATTCCTTTATCCTCCGACCACAAGCCCGACCGACCTGACGAATTGCTCCGAGTGCAAGCTGCCGGAGGGCGCGTGATATATTGGGATGTTCCGAGAGTGCTTGGAGTGCTAGCTATGTCCAGAGCAATAGGTGACAACTACTTGAAACCGTACGTGATCTCGGAGCCGGAGGTGACGGTAACGGAGCGTACGGATGAAGACGAGTGTTTGATCCTGGCGAGTGATGGGCTTTGGGACGTGGTGTCAAACGACACAGCATGCGGGGTGGTGAGGATGTGCCTGAAGGCGCAGAAGCCTCCGTCGCCGCCGGGGTCTCCGGGGAGCGACATGTCGGTGGGATCCGCCGCTGACGGCTCCGACAAGGCCTGTTCAGACGCGTCCATTTTGCTAACAAAGTTGGCGCTGGCGAGGCACAGTACGGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAGATCGACAATCCAATACCAACATCATTAACAAATCTAACTAA 1284 0.5374 MAGICCGVVGEGETLPPIDPTSRPSRRRRLDPVPLKYIADMAVPPPEGSRKLQKRDFCSASTERRECKIAVDNSESSGEKHVEEEHKKESQIDEVSLTVNSTIPSSNFSMTELEEEIIQNCPKFGVTSVCGRRRDMEDAVSVYPAFCQEQEYHFFGVFDGHGCSHVATMCKDRLHEIVKEEIGGARDYLEWQPVMEQSFARVDEEVQTWNQSNQSSSCRCELQTPHCDAVGSTAVVAVVTPDKVIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQAAGGRVIYWDVPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKAQKPPSPPGSPGSDMSVGSAADGSDKACSDASILLTKLALARHSTDNVSVVVVDLRRDRQSNTNIINKSN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1535 427 ProSitePatterns PPM-type phosphatase domain signature. 154 162 IPR000222 GO:0043169
Dere04g1535 427 MobiDBLite consensus disorder prediction 359 380 - -
Dere04g1535 427 SUPERFAMILY PP2C-like 117 413 IPR036457 -
Dere04g1535 427 SMART PP2C_SIG_2 137 412 IPR001932 -
Dere04g1535 427 SMART PP2C_4 111 410 IPR001932 -
Dere04g1535 427 CDD PP2Cc 123 412 IPR001932 -
Dere04g1535 427 PANTHER PROTEIN PHOSPHATASE 83 412 IPR015655 GO:0004722|GO:0006470
Dere04g1535 427 MobiDBLite consensus disorder prediction 10 33 - -
Dere04g1535 427 ProSiteProfiles PPM-type phosphatase domain profile. 123 412 IPR001932 -
Dere04g1535 427 FunFam Protein phosphatase 2C 37 118 419 - -
Dere04g1535 427 Gene3D - 117 421 IPR036457 -
Dere04g1535 427 Pfam Protein phosphatase 2C 124 404 IPR001932 -
Dere04g1535 427 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1535 Dere-ChrDere04 17039908 17041592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1535 1 418 PP2C-type Phosphatase Gene Family AT3G11410 59.629 1.30e-147 424