Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1529 ATGAACTTTGAACTCTATGGGCTTCAAAGAGCTATTGGGCCGAGATCACTTTCAGAACAAACTATTCTATTGGATTGCCTTAGTCCAGACCAACTTCTGGATCTCTATAAGGGAAAGCAAGGGCATATCACAATGAAGGCGCTGATTCTGGTTGGAGGATTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTCCCTAAGCCTCTTGTTGATTTTGCTAACAAACCCATGATCCTGCACCAGATAGAGGCTCTTAAGGCCACTGGAGTTACTGAAGTGGTATTAGCTATCAATTACCAACCAGAGGTGATGTTGAATTTTTTGGAGGAGTTTGAGACAAAGCTTGGCATCAAGATCACATGTTCCCAAGAAACTGAGCCACTGGGGACTGCAGGTCCGCTGGCTCTTGCCAGGGACAAGCTGATAGATGACTCTGGAGAGCCATTTTTTGTACTTAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGCATTTCATAAGGCCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTTGATGAGCCATCAAAATATGGTGTGGTTGTTATGGAGGAGACCACAGGGCAGGTTGAGAGATTTGTAGAAAAACCAAAATTATTTGTAGGTAACAAAATTAATGCTGGAATCTACCTTTTGAACCCCTCAGTTTTGGATCGAATTCAACTGAGGCCTACTTCTATCGAGAAAGAAGTGTTTCCAAATATTGCAGCAGAGAAAAAGCTGTATGCAATGGTCCTGCCGGGATTCTGGATGGACATTGGACAACCAAGGGACTATATCACTGGCTTGAGACTCTACTTAGACTCACTGAGGAAAAAGTCTTCTTCTAAGTTGGCCAGGGGTCCTGACATTGTGGGTAATGTCATTGTGGATGAGACTGCCAAAATTGGCGAGGGATGTCTTATTGGACCTGATGTTGCAATTGGTCCTGGCTGTGTTGTTGAGTCAGGTGTTAGACTCTCTTGTTGCACAGTAATGCGAGGAGTTCGGATTAAAAGTCATGCTTGCATATCTAGCAGTATCATCGGTTGGCATTCCACAATTGGTCAGTGGGCTCGTGTTGAAAACATGACTATTCTTGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGCGTGGTTTTGCCCCACAAGGAGATCAAGTCAAGCATTCTGAAGCCTGAGATAGTCATGTGA 1218 0.4392 MNFELYGLQRAIGPRSLSEQTILLDCLSPDQLLDLYKGKQGHITMKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKATGVTEVVLAINYQPEVMLNFLEEFETKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIAFHKAHGGEASIMVTKVDEPSKYGVVVMEETTGQVERFVEKPKLFVGNKINAGIYLLNPSVLDRIQLRPTSIEKEVFPNIAAEKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSSKLARGPDIVGNVIVDETAKIGEGCLIGPDVAIGPGCVVESGVRLSCCTVMRGVRIKSHACISSSIIGWHSTIGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1529 405 CDD M1P_guanylylT_B_like_N 45 278 IPR045233 GO:0004475|GO:0005525|GO:0009298
Dere04g1529 405 Pfam Bacterial transferase hexapeptide (six repeats) 305 338 IPR001451 -
Dere04g1529 405 Gene3D Hexapeptide repeat proteins 280 400 - -
Dere04g1529 405 Pfam Nucleotidyl transferase 46 273 IPR005835 GO:0009058
Dere04g1529 405 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 44 277 IPR029044 -
Dere04g1529 405 FunFam mannose-1-phosphate guanyltransferase beta 45 276 - -
Dere04g1529 405 SUPERFAMILY Nucleotide-diphospho-sugar transferases 45 356 IPR029044 -
Dere04g1529 405 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 45 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1529 Dere-ChrDere04 16996652 17002035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1529 40 353 Eukaryotic Initiation Factors Gene Family AT2G34970 21.149 3.50e-08 53.5