Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1524 ATGACCACACAAGGACAGGCTGGGATTGACCATGCTGTGCTTGATGATATAATCAGACGGCTCACAGAAGTCCGATTAGCCAGACCCGGAAAACAGGTTCAGCTCTCTGAGACCGAGATCAAGCAGCTATGTGTCGCTTCTAGAGATATCTTTGTTCAGCAGCCCAATTTACTCGAACTCGAAGCCCCCATCAAGATTTGCGGTGACATTCACGGGCAGTACAGTGACTTATTAAGGCTTTTTGAGTATGGGGGTTTTCCTCCTAGCTCTAACTATCTGTTTTTAGGAGACTATGTTGATCGTGGGAAGCAGAGCTTAGAAACCATATGCCTTTTACTTGCCTACAAGATCAAATATCCAGAGAACTTTTTCCTTCTGAGGGGAAATCATGAATGTGCTTCCATTAATAGGATATATGGATTTTATGATGAATGTAAGCGACGGTTCAATGTGAGGCTTTGGAAATCTTTTACAGACTGCTTTAACTGCCTTCCTGTCGCAGCCCTTGTAGATGACAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGACCTAACAAACTTGGATCAAATTAGAAATTTATCTCGTCCAGCTGTTGTTCCAGACACAGGATTGCTCTGTGATTTGCTTTGGTCAGACCCTGGTAGAGATGTGAAGGGATGGGGTATGAATGACAGAGGGGTCTCATACACCTTTGGCCCTGATAAGGTGGCTGAATTTTTGACAAAGCATGACTTGGACCTTATCTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCCGATAGGCAACTTGTTACAGTATTTTCAGCTCCTAACTACTGTGGTGAATTTGACAATGCTGGTGCCATGATGAGCGTGGATGAAAACTTGATGTGCTCTTTCCAGATCCTTAAGCCTGCAGAGAAAAAAGCCAAGTTCATGATGTGA 939 0.4388 MTTQGQAGIDHAVLDDIIRRLTEVRLARPGKQVQLSETEIKQLCVASRDIFVQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPSSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKSFTDCFNCLPVAALVDDKILCMHGGLSPDLTNLDQIRNLSRPAVVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKAKFMM 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1524 312 Gene3D - 6 312 IPR029052 -
Dere04g1524 312 FunFam Serine/threonine-protein phosphatase 61 312 - -
Dere04g1524 312 SMART pp2a_7 35 305 IPR006186 GO:0016787
Dere04g1524 312 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Dere04g1524 312 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Dere04g1524 312 CDD MPP_PP1_PPKL 13 303 - -
Dere04g1524 312 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Dere04g1524 312 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Dere04g1524 312 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Dere04g1524 312 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Dere04g1524 312 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Dere04g1524 312 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Dere04g1524 312 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Dere04g1524 312 SUPERFAMILY Metallo-dependent phosphatases 24 308 IPR029052 -
Dere04g1524 312 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Dere04g1524 312 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1524 Dere-ChrDere04 16946677 16948795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1524 64 251 Calmodulin-binding Proteins AT5G63870 32.143 2.40e-28 109