Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1516 ATGGCAGGCACCATGTATTCATGTTCATGGATTCTTATTCTCAGCCTCACAACCATGCTTCTGACAACCCATGCCGATTCTCAAGAGGACACAAAGACTTATATTGTGTATATGGGTAACCATCCAAGTGGAGACGCCCCCAAGTCAGTGCTTCACATGAGCATGCTCCAAAAAGCCCTTGGCAGCAATAGAGCAGCAGATGCTCTACTCCATAGCTTCAAAAGGAGTATCAATGGGTTTGTTGTGAAGCTTAAGGAGGAGGAGGTGCAAAGAATAGCTGCAATGGAAGGAGTAGTTTCTGTGTTCCCAAATCGGAAGAAACAATTACACACCACAAGGTCATGGGACTTCATCGGCTTTCCGCAACAAGTGAATAGAGCTACCAAAGAAAGTGATATAATTATAGGAGTACTTGACACAGGAATCTGGCCGGAGTCCAATAGCTTCAATGACTCAGGGTTTGGTCCCCCACCTGCCAAATGGAAGGGAGCTTGCTACAATATCACCTGTAACAATAAAATCATTGGAGCTAAATATTATCACAGTAGTAAACTATTCAAAGAAGATGATGTCATATCTCCAATTGACTCAGACGGCCATGGGACACACACTGCATCAACTGCTGCTGGAGGCCTGGTTAGCTCCGCGAGCCTCTATGGTCTTGGCTTTGGGACAGCAAGAGGAGGGGCTCCATCAGCAAGAATTGCAGTCTATAAGGTTTGTTGGTCTGACGGATGTCATGATGCCGACATTCTTGCAGCATTTGAGGATGCAATAGCAGATGGGGTTGACATAATCTCCTGCTCTCTTGGAGATGAAATACGTAGTCACTATTTCAATGATTCTATTGCTATTGGAGCTTTTCATGCTATGAGACATGGAATCTTGACCGCAAATTCAGCTGGGAACAGTGGTCCAAGACTCGCAACAATTAGTAATTTCTCACCTTGGTCTCTTTCTGTGGCGGCCACAACCACTGACAGAAAGTTCATCACCAAGATTCAGTTGGGGAACAATCTGGTTTACGAGGGAGTTTCAGTAAACACCTTTGACCAAGGTAGTAATCAGTATCCTATAATCTATGGTGGGGATGTACCAAACTCCCTCGAAGGCTATAATAACTCTATATCCAGGCTTTGCTTAGAAAACTCATTGGACCAAAATTTGGTAAAGGGCAAAATAGTTCTATGTGATGGCTTTGTCGCACCAAAGAGAGTTGGTTTTGCATCTGGTGCAGCTGGAATTGTAATGCATACTGATAGAGTAAAAGATACAGGCGACACTTTTGCTTTGCCTGCATCTCATATTGACACACAGGATGCTAATAACTTATACACCTACATGACCACCACAAGCAACCCAACCGCGACCATATTGAAGAGCACCAATGTCAATGATACTTTTGCCTCTTATGTAGTCTCCTTTTCCTCAAGGGGTCCCAATCCTATTACACTTAACATTCTCAAACCAGATATTGCAGCACCGGGAGTTGAAATTCTGGCTGCATGGTCTCCAAAAGGTCCTCCTTCTGGAATCAAAGGTGATAATAGAAAAGTAGAGTTTAATATCATCTCAGGGACATCAATGGCGTGCCCACATGCCACTGGTTTAGCTGCCTACATCAAATCCTTCCACCCTTCGTGGTCTCCTGCAGCAATTAAGTCGGCAATTATGACAACAGCCACGCCAATGAAATCTGAAGTCAACCCAGATGCTGAGTTCGCATATGGAGCAGGCCATATAAATCCAACCGAGGCAGTAAGTCCTGGTTTAGTATACGATGCTAGTGAAACCGACTATGTGAATTTTCTATGTGGACAAGGTTACAATACGAGATTGCTGCAGATTGTAACTGGGGATAACAGTAGCTGTATTGGAGTCACCGATGGGAGTGTTTGGGATTTAAACTACCCTTCTTTTGCTGTTTCCAACCCTCCTAATGTACTCATCTCTCGAGTTTTCACTAGGACTGTCACAAATGTTGGTTCCCCAACATCCATATACAAGGCTATTGTGACTGCTCCAACGGGAGTCAAAATCCAAGTGGTCCCTCCAAGTTTGTCATTCAGTTCCATAGGGCAGAAGCTGTCGTTTAGACTCAGTGTTAGTGGAAGCATAGGGAGAATCATAGCCTCTGCCTCTTTGGTTTGGGATGATGGCACCCACCAAGTGAGAAGCCCCATTACTGTATTTCCTGTCGAATAG 2205 0.444 MAGTMYSCSWILILSLTTMLLTTHADSQEDTKTYIVYMGNHPSGDAPKSVLHMSMLQKALGSNRAADALLHSFKRSINGFVVKLKEEEVQRIAAMEGVVSVFPNRKKQLHTTRSWDFIGFPQQVNRATKESDIIIGVLDTGIWPESNSFNDSGFGPPPAKWKGACYNITCNNKIIGAKYYHSSKLFKEDDVISPIDSDGHGTHTASTAAGGLVSSASLYGLGFGTARGGAPSARIAVYKVCWSDGCHDADILAAFEDAIADGVDIISCSLGDEIRSHYFNDSIAIGAFHAMRHGILTANSAGNSGPRLATISNFSPWSLSVAATTTDRKFITKIQLGNNLVYEGVSVNTFDQGSNQYPIIYGGDVPNSLEGYNNSISRLCLENSLDQNLVKGKIVLCDGFVAPKRVGFASGAAGIVMHTDRVKDTGDTFALPASHIDTQDANNLYTYMTTTSNPTATILKSTNVNDTFASYVVSFSSRGPNPITLNILKPDIAAPGVEILAAWSPKGPPSGIKGDNRKVEFNIISGTSMACPHATGLAAYIKSFHPSWSPAAIKSAIMTTATPMKSEVNPDAEFAYGAGHINPTEAVSPGLVYDASETDYVNFLCGQGYNTRLLQIVTGDNSSCIGVTDGSVWDLNYPSFAVSNPPNVLISRVFTRTVTNVGSPTSIYKAIVTAPTGVKIQVVPPSLSFSSIGQKLSFRLSVSGSIGRIIASASLVWDDGTHQVRSPITVFPVE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1516 734 SUPERFAMILY Subtilisin-like 109 591 IPR036852 GO:0004252|GO:0006508
Dere04g1516 734 FunFam Subtilisin-like protease SBT1.5 132 337 - -
Dere04g1516 734 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Dere04g1516 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 730 IPR045051 -
Dere04g1516 734 Pfam Fibronectin type-III domain 634 730 IPR041469 -
Dere04g1516 734 ProSiteProfiles Serine proteases, subtilase domain profile. 114 587 - -
Dere04g1516 734 CDD PA_subtilisin_like 334 458 - -
Dere04g1516 734 Gene3D Peptidase S8/S53 domain 132 600 IPR036852 GO:0004252|GO:0006508
Dere04g1516 734 Gene3D - 604 731 - -
Dere04g1516 734 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Dere04g1516 734 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Dere04g1516 734 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Dere04g1516 734 Pfam Peptidase inhibitor I9 33 110 IPR010259 -
Dere04g1516 734 CDD Peptidases_S8_3 107 562 IPR034197 -
Dere04g1516 734 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Dere04g1516 734 Gene3D - 327 465 - -
Dere04g1516 734 FunFam Subtilisin-like protease SBT5.3 22 110 - -
Dere04g1516 734 Pfam Subtilase family 131 579 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1516 Dere-ChrDere04 16907473 16911097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1516 29 731 Subtilisin-like Serine Gene Family AT5G59090 48.257 0.0 641