Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere04g1490 | ATGGTGATTGCTGACACGCCTCGTGTTATTGATATAGAGAATGGTTGTCCACGGAGCTCCGTCGTCACCGGCAGTGAAGGGTATACTTCAGAGAGCAGTGACAGGTCCGATGCGGAGATTGTGGGAGGGTCCGAAAACGGAAGGGGATCCTCTTTGTCGGAGTGTTCGGTGGAGGTGGATCTGGGCAGTGCTGTAGCTGAGGTTAAGGTACATTTGGGTAAGGTGGAGAGGGATTGTAGGATTTGTCATCTGAGCATGGATATGACCAATCATGAATCTGGGACCTCCATTGAGCTGGGATGTTCTTGCAAGGATGATTTGGCTGCTGCCCACAAACACTGTGCTGAGACTTGGTTCAAGATCAAGGGTAACAAAACCTGTGAAATCTGTGGATCAATTGCACACAATGTTGCTGGTGCTTTTGGAGTTGAAACGATAGAACAATGGAATGAGGCAAATGACGCCTCCATGGTACCACCAACTGGACATGTGACCCCTTCAGAAACTCGAAATTTCTGGCAAGGCCACCGCTTCTTGAATTTTCTGCTTGCCTGCATGGTCTTTGCCTTTGTCATTTCTTGGCTTTTTCACTTCAATGTGCCCTCATGA | 609 | 0.4844 | MVIADTPRVIDIENGCPRSSVVTGSEGYTSESSDRSDAEIVGGSENGRGSSLSECSVEVDLGSAVAEVKVHLGKVERDCRICHLSMDMTNHESGTSIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICGSIAHNVAGAFGVETIEQWNEANDASMVPPTGHVTPSETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere04g1490 | 202 | SMART | ringv_2 | 78 | 131 | IPR011016 | GO:0008270 | |
Dere04g1490 | 202 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 139 | IPR013083 | - | |
Dere04g1490 | 202 | PANTHER | ZINC FINGER, RING-CH-TYPE | 34 | 201 | - | - | |
Dere04g1490 | 202 | MobiDBLite | consensus disorder prediction | 20 | 50 | - | - | |
Dere04g1490 | 202 | MobiDBLite | consensus disorder prediction | 20 | 39 | - | - | |
Dere04g1490 | 202 | Pfam | RING-variant domain | 79 | 130 | IPR011016 | GO:0008270 | |
Dere04g1490 | 202 | SUPERFAMILY | RING/U-box | 76 | 133 | - | - | |
Dere04g1490 | 202 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 71 | 137 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere04g1490 | Dere-ChrDere04 | 16476530 | 16478898 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere04g1490 | 8 | 202 | C3H Transcription Factor Family | AT5G05830 | 59.184 | 1.28e-71 | 214 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere04g1490 | 04 | 16476530 | 16478898 | Dere04g1490 | 04 | 16476530 | 16478898 | ECH |