Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1470 ATGTCCGACGCTTTGATCAATGGGCTTGCTGGAGCTGGAGGAGGGATCATTGCCCAGCTCATCACATATCCTCTCCAAACTGTAAACACTCGTCAACAGACCGAGCGTGATCCCAAAAAAGACAAGAGGAATCTTGGAACTCTTGAGCAAATGTGCCAGGTTGTAAAGCACGAGGGGTGGGAGCGGTTATATGGAGGATTGATGCCATCGCTTGTGGGTACAGCTGCGTCTCAGGGTGTTTACTACTATTTCTATCAAGTATTCAGGAACAAGGCTGAAGCAGCTGCACTAGAACGAAAAAAGATAGGCGTTGGTGATGGATCCGTTGGGATGTTATCTTCACTTCTTGTCGCTGCCTTATCCGGGTGTGTTAATGTGCTCCTGACAAATCCTATATGGGTAGTTGTTACACGTATGCAGACTCATAGAAAGGAGTCAAAAAGAACTCTGCCTGGTCATGGATTGTCTGTTGCCATGGAACAAACAGTTCTTTCTGCAGTTGAGCCTCCTCCTTATGGAACTACCAATGTGATTCAAGAAGTGTATGGTGAAGCTGGAGTTTGGGGTTTCTGGAAAGGTGTATTACCAACATTAATCATGGTAAGCAATCCTTCTATACAGTTCATGCTGTATGAAGCCATGTTGACACGGTTAAAAAAAAGACGTGCTTTGAGTAAGAAGGGTATTGATGGGGTTACTGCTTTAGAGATATTTTTTCTTGGGGCTTTGGCTAAGTTTGGAGCTACTGTTGTAACTTATCCTCTTCTTGTTGTCAAGGCTAGGCTTCAAGCAAGACAGGTTACCATTGAAGACAAAAGGCACCATTATAAAGGAACATTGGATGCCATCATTAAGATGATCCGCTACGAAGGGTTTTATGGATTTTACAAAGGTATGAGCACGAAAATTGTACAGAGTGTGCTGGCTGCTGCTGTCTTGTTCATGGTGAAGGAGGAGCTAGTTAAGGGGGCTCGTTTCTTGCTTGCTAAGGATGCCGTTAACACTGCAAGGTCAAAGCCTTAA 1023 0.4438 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKDKRNLGTLEQMCQVVKHEGWERLYGGLMPSLVGTAASQGVYYYFYQVFRNKAEAAALERKKIGVGDGSVGMLSSLLVAALSGCVNVLLTNPIWVVVTRMQTHRKESKRTLPGHGLSVAMEQTVLSAVEPPPYGTTNVIQEVYGEAGVWGFWKGVLPTLIMVSNPSIQFMLYEAMLTRLKKRRALSKKGIDGVTALEIFFLGALAKFGATVVTYPLLVVKARLQARQVTIEDKRHHYKGTLDAIIKMIRYEGFYGFYKGMSTKIVQSVLAAAVLFMVKEELVKGARFLLAKDAVNTARSKP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1470 340 Gene3D Mitochondrial carrier domain 5 327 IPR023395 -
Dere04g1470 340 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 325 IPR044712 GO:0006862|GO:0055085
Dere04g1470 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Dere04g1470 340 SUPERFAMILY Mitochondrial carrier 3 319 IPR023395 -
Dere04g1470 340 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Dere04g1470 340 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Dere04g1470 340 Pfam Mitochondrial carrier protein 234 321 IPR018108 -
Dere04g1470 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Dere04g1470 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1470 Dere-ChrDere04 16346791 16352008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1470 24 328 Chloroplast and Mitochondria Gene Families AT2G47490 30.128 1.03e-30 116