Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1466 ATGGCTTCTTCTACCCCCACTCTAGTTTCGAAATGCACAGTCTTCCCAGACCAAAAATCCACTCTCGGAGACCTCAAGCTCTCCGTCTCCGACCTTCCCATGCTCTCCTGCCACTACATCCAGAAGGGTTGCCTCTTCACTCTCCCTCCTGATTCTCTCCCTTTTCATTCTCTTATCCCTCTCCTCAAGTCCGCTCTCTCTCGCACTCTCTCTCTCTTCCCTCCTCTCGCCGGCCGCTTGAAGACCGACTCCGATGGCTACGTTTACATCACCTGCAACGACGCCGGTGTCGATTTCCTCCACGTCATTGCCTCCGGATTCCTCATCCGCGACCTCCTGGCCCCTCCTGACGTCCCTGAATCTTTTAAGGAATTCTTCGCTTTCGACAGAAAAGTTAGCTACAGCGGTCATTTCAGCCCAATTATGGCCGTTCAGGTCACCGAGCTCGCAGATGGCGTCTTCATCGGCTGCGCCGTCAACCACGCCGTCTTAGACGGCACCTCCTTCTGGAACTTCTTCAATTCCTTCGTCGAAGTCTTCAGAGGAGTCAACAACATTTCCAAGGTACCGGACTTCCTCCGGGACTCCGTTTTAATCTCGAAAGCGGTGCTCCAGTTGCCGGAGGGCGGACCGAAAGTCACCTTCAACCCCTACGAGCCGTTGCGGGAGAGAATTTTCAGCTTCAGCCAGGGAGCAATTCAGAGGCTGAAAGCCAGAACGAACAACCGGAGATGGATGGGTAACGGCAACGGGAACATCAATAGCGCGGCGGAGTTGATGGGGAAGCAGAGCAACGATCCTTACCAGGAGGAAAACGACAAGGTAACGTCCATCATCGAGACCTGGCTCAAGAATGCCGTTTCGAAACCACAAGTTGCTGCTGCGGAAACGGGTGAGATGTCGTCGTTTCAGTCGCTGTGTGCACTTCTCTGGCGTGCGGTTACGCGTGCAAGGAAGTTGCCAGCGTCGAAAACGACAACGTTCAGAATGGCGGTGAACTGTCGTCACAGGCTAGAGCCCAAGTTGGACGGGTACTATTTCGGGAATGCGATTCAAAGCGTACCCACGTATGCGTCAGCGGGTGACGTACTGTCACGGGATCTGCGGTGGTGCGCAGAGCAACTGAACAAGAACGTGAAGGCGCACGACGACACTATGGTGCGACGGTTCGTACAGGATTGGGAGAGTAACCCGAGGTGCTTCCCGCTAGGGAATTTCGATGGTGCGTCCATCACCATGGGTAGCTCCCCGCGATTCCCAATGTACGACAATGATTTCGGGTGGGGCAGACCCGTGGCCGTTCGGAGCGGTCCGGCCAATAAATTTGACGGCAAGATCTCTGCCTTTCCTGGCAGACAAGGGAGCGGAAGCGTGGACTTGGAGGTCGTTTTGGCGCCCGAAACCATGGCTGGGTTGGAGTCCGACTCCGAGTTCATGCTATATGCGTCGTCCTTCCGGTTATAA 1464 0.5512 MASSTPTLVSKCTVFPDQKSTLGDLKLSVSDLPMLSCHYIQKGCLFTLPPDSLPFHSLIPLLKSALSRTLSLFPPLAGRLKTDSDGYVYITCNDAGVDFLHVIASGFLIRDLLAPPDVPESFKEFFAFDRKVSYSGHFSPIMAVQVTELADGVFIGCAVNHAVLDGTSFWNFFNSFVEVFRGVNNISKVPDFLRDSVLISKAVLQLPEGGPKVTFNPYEPLRERIFSFSQGAIQRLKARTNNRRWMGNGNGNINSAAELMGKQSNDPYQEENDKVTSIIETWLKNAVSKPQVAAAETGEMSSFQSLCALLWRAVTRARKLPASKTTTFRMAVNCRHRLEPKLDGYYFGNAIQSVPTYASAGDVLSRDLRWCAEQLNKNVKAHDDTMVRRFVQDWESNPRCFPLGNFDGASITMGSSPRFPMYDNDFGWGRPVAVRSGPANKFDGKISAFPGRQGSGSVDLEVVLAPETMAGLESDSEFMLYASSFRL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1466 487 Gene3D - 220 479 IPR023213 -
Dere04g1466 487 Gene3D - 7 206 IPR023213 -
Dere04g1466 487 Pfam Transferase family 7 479 - -
Dere04g1466 487 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1466 Dere-ChrDere04 16293511 16294974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1466 61 473 Monolignol Biosynthesis Gene Families AT5G48930 27.040 1.28e-33 130