Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1463 ATGGAAGAGGGAGGCATGTCAGGCTTTTGTATGAGAGGTGCGGCAGGTGGTGGGACTAGCTCTGGGACCAAGTGTGGGCGTTGGAATCCCACAACTGAACAGGTCAAGCTTCTTACACAGCTCTTCAGCTCTGGTCTCAGAACCCCAAGCACTGACCAGATTCAAAAGATCTCCACCCACCTCAGCTTTTACGGCAAGATTGAGAGCAAGAACGTCTTCTACTGGTTCCAGAACCACAAAGCTAGGGAACGGCAGAAACGTCGCAAGGTCTCCTTTGATCACGATAAGGATCACGTCAATCATACTCATTCGCATAAATCTAAACATAACAATATGAATCAAGTTTTGGAGCCAGAGAAAGTGAGAGAGACGCTTCAGCTCTTCCCCTTGAACTCTTTTGGCGACTCAGAAGCAGAGAGGCTGAGGGTGCATGCCAATTGCAGGGACGATACGATGTTTCCGTACACTCAAGGGGAACAATTGGAGCACCCGCCATTGGATCTGCGCTTGAGCTTTCTGTAA 522 0.4923 MEEGGMSGFCMRGAAGGGTSSGTKCGRWNPTTEQVKLLTQLFSSGLRTPSTDQIQKISTHLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDHDKDHVNHTHSHKSKHNNMNQVLEPEKVRETLQLFPLNSFGDSEAERLRVHANCRDDTMFPYTQGEQLEHPPLDLRLSFL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1463 173 SUPERFAMILY Homeodomain-like 18 89 IPR009057 -
Dere04g1463 173 FunFam WUSCHEL-related homeobox 11 24 92 - -
Dere04g1463 173 CDD homeodomain 27 87 IPR001356 GO:0003677
Dere04g1463 173 Gene3D - 24 92 - -
Dere04g1463 173 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
Dere04g1463 173 Pfam Homeodomain 25 85 IPR001356 GO:0003677
Dere04g1463 173 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 111 IPR044555 GO:0003700|GO:0099402
Dere04g1463 173 MobiDBLite consensus disorder prediction 85 113 - -
Dere04g1463 173 SMART HOX_1 23 90 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1463 Dere-ChrDere04 16263599 16264222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1463 6 173 Wox Gene Family AT3G11260 56.989 2.10e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere04g1463 Homeodomain 2.2e-17 CL0123