Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere04g1462 | ATGGCGTCCAGCCAGCGCACAGTACTGCAATTCTCTACCTCTTCGCAGAGCTTAACAGCAAGGCTCAACCCTCTGGTTATATTCAACATCTTCGACTGCTACGTTCGCCGCCCTGACCAAGCCGATCGCGTCATTGGAACGCTACTCGGGTTCCTCTTGCCCGATGGAACCGTTGATGTCCGCAATTCGTACGCCGTTCCACACAACGAGTCTCTAGATCAGGTTGCTTTGGATATCGAGTACCACCACAATATGTTAATATCCCACCAAAAAGTGAATCCGAAGGAAGTGATAGTTGGATGGTATTCAAGTGGTCCTGGTGTGACAGGTGGTAGTGCATTAATCCATGAATTTTACTCCCGAGAAGTATCAAATCCTATACATATAACTGTTGATACCGGATTCACCAATGGACAGTGTACCATAAAAGCTTATGTATCAAACAATTTATCTCTTGGAGATCAGCAAATTGCTGCACAGTTTCAAGAAATTCCTTTGGATCTTCGTATGATTGAAGCTGAGCGAATTGGATTTGATGTTCTGAAGTCAACCATTGTTAGCAAAATCCCCACTGATTTAGAAGGGATGGAAGCATCAATGGAACATCTACTAGCCTTGATTGACGACATCTGCAAATATGTTGATGATGTTGTGGGAGGGCATATAATACCAGACAACAGTATTGGGACATTTATATTAGATGCCGTAGGTGCTCTTCCCAAATTGTCATCGCCAGCTTTTGATAAGCTTGTGAATGACAGTTTGCAGGACCACTTGCTCTTGCTATACTTATCAAGCATCACTAGGACACAGCTTAGCTTGGCTGAAAAATTGAACACAGCTGCTCAGATTCTGTAG | 858 | 0.4371 | MASSQRTVLQFSTSSQSLTARLNPLVIFNIFDCYVRRPDQADRVIGTLLGFLLPDGTVDVRNSYAVPHNESLDQVALDIEYHHNMLISHQKVNPKEVIVGWYSSGPGVTGGSALIHEFYSREVSNPIHITVDTGFTNGQCTIKAYVSNNLSLGDQQIAAQFQEIPLDLRMIEAERIGFDVLKSTIVSKIPTDLEGMEASMEHLLALIDDICKYVDDVVGGHIIPDNSIGTFILDAVGALPKLSSPAFDKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL | 285 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere04g1462 | 285 | Gene3D | Cytidine Deaminase, domain 2 | 7 | 185 | - | - | |
Dere04g1462 | 285 | Pfam | Maintenance of mitochondrial structure and function | 172 | 278 | IPR024969 | - | |
Dere04g1462 | 285 | SMART | pad1_6 | 19 | 150 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Dere04g1462 | 285 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 17 | 121 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Dere04g1462 | 285 | CDD | MPN_eIF3f | 21 | 278 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Dere04g1462 | 285 | ProSiteProfiles | MPN domain profile. | 20 | 151 | IPR037518 | - | |
Dere04g1462 | 285 | Hamap | Eukaryotic translation initiation factor 3 subunit F [EIF3F]. | 18 | 281 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Dere04g1462 | 285 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | 12 | 282 | - | - | |
Dere04g1462 | 285 | FunFam | Eukaryotic translation initiation factor 3 subunit F | 8 | 186 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere04g1462 | Dere-ChrDere04 | 16254440 | 16257789 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere04g1462 | 2 | 285 | Eukaryotic Initiation Factors Gene Family | AT2G39990 | 72.509 | 7.55e-147 | 412 |