Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1418 ATGGGAAGTTCTGTGCGAGCCAAAGCAGCTGTGGTCGTAGCTCCTTCTGATCCAACCCCAGCTTGTGTTCTCGCTCTTTCTGCTCTTGACTCTCAACTCTTCCTTCGTTTCACCATAGAGTACCTCTTAATTTACACACCCTGCCCTGGCTTGGACCACGTTGCCACCACGGCTCGTCTCAAAGCTGCATTAGCCCAAGCTTTGGTTCCATACTACCCATTCGCCGGAAGGGTCAGGCCTAGGCCTGGTGGTTCGGGCCTTGAGGTGGTGTGTCGAGCCCAGGGTGCTGTGTTTATTGAAGCCTCTTCTGATCGTTACACGGCCAGCGACTTCGAGAAAGCCCCCAAAACAGTGACGCACTGGAGAAAACTCTTGTCCCTCTACACGAATGACGTTCTCAAAGGATCGCCGCCGCTGGTTGTTCAGCTCACGTGGCTCAAGGATGGAGCCGCCGCCGTCGGTGTGGGATTCAACCATTGTATCTGCGATGGTATCGGCAGTGCCGAGTTTCTCAACTATTTCGCTGAGTTGGCTTCTGGGAAAAGCCTGGAACTCAGGCCCAGGCCAGTTTGGAATCGTCACCTTCTTAACCCATCGCCCATGAAGCCTAATCGGGCCAGCTCCACAATCCTCCCCGAGTTCAACCGAGTCCCTGATCTCTGCGATTTCATGACTCGGGTTTCCAGCGACCTCAAACCAACCTCTGTTATATTCGACAGAAGACGCCTCAACGAGCTCAAGAATGTGGCTTGGTCTACGAGTCAACTCAGCGAGTCGTCCTACACGTCCTTCGAGGTTCTCGCGGCTCACGTGTGGAGAAGCTGGGCGAGAGCAATAGGGTTTCCTTCAAACCAAATCCTAAAGCTGCTCTTCAGCATCAACGTGCGGAGCCGCGTGAAGCCGGGCATCCCCGACGGGTACTACGGGAACGCGTTCGTGTTGGGATGTGCGCAGAGCAGCGCGAAGGAGCTGGTGCAGAAGGGTCTCGGATACGGGTCGGGTTTGGTGAAGAGTGCAAAGGAGAGAGTGGACAACGAGTACGTGAGGAGGGTGATTGAGTTGGTGTCCGAGTCGAGAGCGAGTCCGGACTCGGTGGGTGTGCTGATAGTGTCACAATGGTCAAGGCTGGGATTGGAAAGGGTTGACTTCGGAATGGGAAAGCCAATCCACATGGGGCCCATATGCTGCGATAGGTACTGTTTGTTTTTGCCAGTGAGCAATCAGAGGGAGGCTGTGAAGGTGATGGTGGCTGTCCCCACCTCTGCCGTTGACCATTATCAGTATTTCCTCAGAGCTTCGCATTTATGA 1308 0.5459 MGSSVRAKAAVVVAPSDPTPACVLALSALDSQLFLRFTIEYLLIYTPCPGLDHVATTARLKAALAQALVPYYPFAGRVRPRPGGSGLEVVCRAQGAVFIEASSDRYTASDFEKAPKTVTHWRKLLSLYTNDVLKGSPPLVVQLTWLKDGAAAVGVGFNHCICDGIGSAEFLNYFAELASGKSLELRPRPVWNRHLLNPSPMKPNRASSTILPEFNRVPDLCDFMTRVSSDLKPTSVIFDRRRLNELKNVAWSTSQLSESSYTSFEVLAAHVWRSWARAIGFPSNQILKLLFSINVRSRVKPGIPDGYYGNAFVLGCAQSSAKELVQKGLGYGSGLVKSAKERVDNEYVRRVIELVSESRASPDSVGVLIVSQWSRLGLERVDFGMGKPIHMGPICCDRYCLFLPVSNQREAVKVMVAVPTSAVDHYQYFLRASHL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1418 435 Gene3D - 224 429 IPR023213 -
Dere04g1418 435 PANTHER ACYL TRANSFERASE 4 4 425 - -
Dere04g1418 435 Gene3D - 2 210 IPR023213 -
Dere04g1418 435 Pfam Transferase family 5 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1418 Dere-ChrDere04 15752539 15753846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1418 5 430 Monolignol Biosynthesis Gene Families AT5G48930 28.764 4.90e-47 166