Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1417 ATGAATGCATCTGACGTCACCGCCGGTCACAATGCGCGGCAAAGGCCAATTGCTGCTCCCTTTGCCCTTCACGAGTCCGAATCCGATGCTTCGCTTCCCACCCAAATCCCTACTCCTCCGTTTTTATCCAATTCACATCTTCATCTCCACCGTGCCTTTCCATCTTCCTGTCCCCAGCCGGATTCCACCATGAATCGCCCGAACCCGAACCGGTCTCGTCACGGTGGCGGTGGAGGCGGCAGAGAGGATTGTTGGAGCGATGGTGCCACCGAGACATTGATCGAGGCCTGGGGTGACCGTTATACCCAGCTCAACCGCGGTAACCTGCGTCAGAAGGACTGGAACGACGTCGCCGATGCCGTCAACGCCCGTCAAGACGGCGTCAAGCCTCACAAGACCGATGTTCAGTGTAAGTACAGGATCGACACGCTCAAGAAAAAGTATAAGGTCGAGAAGTCGAAGCCGCCCCCGTCCAAGTGGGTTTTTTTTCACCGTCTTGACTATCTGATCGGACCTAACGCTGTCGCTGACAAGAAATCTACGATTGTTACTTCAACCGTCAAATCCTCAAAGGCGAGAGTCAGCCCAAGTCCGATGGTTGTGTCCACGCCAGCACTCTATTCGGGTGGATCTTCGAAGCTGGATTCTGGCGGCGGGTCTATGGAGAGTTCACTTGGGGAGGATGATGAAGATGATGATATGGGGTTTAATGGGAGAAGAGTGAGGAAGCAAAGATTAGAGACGGTGGATTTTTCTGAAGGGGCTGCGTTCAGGGAATTGGCGAGGGCAATTCTAAAGTTTGGGGAGATTTATGAGAGAGTCGAGAGCTCGAAGCAACAGCAAATGATGGAATTGGAGAAGCAGAGAATGGAGTTTACTAAGGATCTGGAGTTTCGAAGAATGAATATGTTCATGGATACCCAATTGGAGGTTGAGAGAATGAAACGCCCCAAGCATGCCGCCACCTCAGGGAAGAAGATATAA 984 0.5193 MNASDVTAGHNARQRPIAAPFALHESESDASLPTQIPTPPFLSNSHLHLHRAFPSSCPQPDSTMNRPNPNRSRHGGGGGGREDCWSDGATETLIEAWGDRYTQLNRGNLRQKDWNDVADAVNARQDGVKPHKTDVQCKYRIDTLKKKYKVEKSKPPPSKWVFFHRLDYLIGPNAVADKKSTIVTSTVKSSKARVSPSPMVVSTPALYSGGSSKLDSGGGSMESSLGEDDEDDDMGFNGRRVRKQRLETVDFSEGAAFRELARAILKFGEIYERVESSKQQQMMELEKQRMEFTKDLEFRRMNMFMDTQLEVERMKRPKHAATSGKKI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1417 327 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 67 318 IPR044823 -
Dere04g1417 327 FunFam trihelix transcription factor ASIL2 85 150 - -
Dere04g1417 327 Gene3D - 85 150 - -
Dere04g1417 327 MobiDBLite consensus disorder prediction 52 85 - -
Dere04g1417 327 Coils Coil 271 291 - -
Dere04g1417 327 MobiDBLite consensus disorder prediction 206 235 - -
Dere04g1417 327 MobiDBLite consensus disorder prediction 56 70 - -
Dere04g1417 327 MobiDBLite consensus disorder prediction 1 40 - -
Dere04g1417 327 Pfam Myb/SANT-like DNA-binding domain 82 167 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1417 Dere-ChrDere04 15744563 15748669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1417 254 316 Trihelix Transcription Factor Family AT3G14180 52.381 8.32e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere04g1417 Myb_DNA-bind_4 2.1e-24 CL0123