Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1410 ATGAACAAGAATTGGAACCAGGGAATTCTGCGATTTGCAGTGGTATGGTTGCTGTTTCATAGCTTCGGTTTGTGCTGGTCTTTAAATGACGAAGGTAAGGCACTATTGAAGTTGAAACAGAGAATAGTGAAGGACCCTTTTGGTGCTTTGTCAAATTGGATTAATGATGAAGGAGAGGTTGACCCGTGTAATTGGTTCGGAATTGAGTGCTCAGATAGAAGAGTGGTTGTCCTGAATTTAAAAGATCTTTGTCTCGGAGGAACTCTGGCCCCTGAGCTTGCAAACCTTGTTCACATAAAGTCTATTATTTTGCGGAACAATTCTTTCTCTGGCATCCTTCCAGACGCATTTACAGATTTGAAAGAGTTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGACCTCTACCAGCGGATCTTGGGAGTAATGTCTCACTAGCAATCCTTTTGCTGGACCACAATGAGCTTATTGGTGGCTTCTCTCCTGAAGTCAATGAACTGATGATGCTATCTGAATATCAAGTAGATAAAAACCAGCTAATTGATACAGCTAAAATGCCATCTTGCACGAAAAGATTCATAAAATGGAATGTTGACCAACATGAAGCAGGTATTCGGAGAATACTGCAAGCGTCTACACCAGAGCTTCGCGATTTTCGTAACCGTGAAGCTGATCCACCTCCTGAAAGCTCTCCTCCATTGCCTTTGCCAGATACTCCTTCACCTTCCCCATCTGTATTGGCAATTCCACCAACAGGGCTGAAGCCAGCTCCTCCTCCCCAGTCTAGTCCCCGCTCTGGAATACCATCTAAAAATACCTCCTCAAAGAAGCGACAAGTTGCAATTTTGGCTGGAGTTATAGGTGGCATTGTATTTCTTCTAGCTTTAGTAACTGCCTATCTCTTTAAAACCAATAAAATAGCTACAGTCAAACCTTGGGCCACGGGATTAAGCGGACAGCTACAGAAGGCATTTGTGACAGGTGCGCAAAAACTAAAAAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTTGTATTTCACCCAGTGGTACAGTGTACAAAGGGACTTTATCTAGTGGAGTTGAAATAGCTGTAGCGTCTGTTGCAGTGACATCATCCAAGGATTGGTCAAAGAGTTCAGAAATGCAGTTCAGGAAGAAGATAGATACATTATCGAAAGTGAATCACAAAAATTTTGTCAATCTGCTTGGATATTGTGAAGAGGAAGAGCCTTTCACCAGAATGGTGGTTTTCGAATATGCCCCTAATGGGACACTCTTTGAGCACTTACATGTAAAAGAATCTGAGCACCTGGATTGGGTAATGCGGCTTAGAATTGCAATGGGCATGGCTTACTGCCTGCAACATATGCACCAGTTGAAGCCTCCCATAGCCCAAAGTAATCTGAACTCATCATATGTCTATCTCACCGACGACTATGCTGCCAAAATCTCAGATTTGAGTTTCTTGAATGAAATAGGTTCAACTGGGACAAAAGCAAGGGGCAGAAAACGCAATGCGCCATTAGCAACTCCAGAAAGTAACATTTATAGCTTTGGTGTTGTGTTACTTGAAATAGTAACGGGCAGGCTTCCTTGTTCAGAAGATAACGGCTCATTTAATGAATGGGCATCAAACTTTTTACAAGGGAACCGACCCCTCAGAGAATTGGTCGATCCTACTCTAGCATCTTTCCAAGGAGATCAATTGGAACAAGTTGCTGAGTTAATTAAATCTTGTGTTCATCCTGACAAAAAGTTGAGACCAACAATGAAAGAAGTCGGTGTGAGATTGAGAGAGATAACAAAAATTACACCTGATGCAGCAGTTCCCAAACTTAATTCACTATGGTGGGCAGAGCTTGAGATTTGTTCTGCAGATGGAAGCTGA 1905 0.422 MNKNWNQGILRFAVVWLLFHSFGLCWSLNDEGKALLKLKQRIVKDPFGALSNWINDEGEVDPCNWFGIECSDRRVVVLNLKDLCLGGTLAPELANLVHIKSIILRNNSFSGILPDAFTDLKELEVLDLGYNNFSGPLPADLGSNVSLAILLLDHNELIGGFSPEVNELMMLSEYQVDKNQLIDTAKMPSCTKRFIKWNVDQHEAGIRRILQASTPELRDFRNREADPPPESSPPLPLPDTPSPSPSVLAIPPTGLKPAPPPQSSPRSGIPSKNTSSKKRQVAILAGVIGGIVFLLALVTAYLFKTNKIATVKPWATGLSGQLQKAFVTGAQKLKRSELEAACEDFSNVICISPSGTVYKGTLSSGVEIAVASVAVTSSKDWSKSSEMQFRKKIDTLSKVNHKNFVNLLGYCEEEEPFTRMVVFEYAPNGTLFEHLHVKESEHLDWVMRLRIAMGMAYCLQHMHQLKPPIAQSNLNSSYVYLTDDYAAKISDLSFLNEIGSTGTKARGRKRNAPLATPESNIYSFGVVLLEIVTGRLPCSEDNGSFNEWASNFLQGNRPLRELVDPTLASFQGDQLEQVAELIKSCVHPDKKLRPTMKEVGVRLREITKITPDAAVPKLNSLWWAELEICSADGS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1410 634 MobiDBLite consensus disorder prediction 227 266 - -
Dere04g1410 634 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Dere04g1410 634 SUPERFAMILY L domain-like 28 184 - -
Dere04g1410 634 FunFam Inactive receptor-like serine/threonine-protein kinase 317 425 - -
Dere04g1410 634 FunFam Nuclear pore complex protein NUP107 28 188 - -
Dere04g1410 634 Gene3D Phosphorylase Kinase; domain 1 315 425 - -
Dere04g1410 634 Gene3D Transferase(Phosphotransferase) domain 1 426 615 - -
Dere04g1410 634 MobiDBLite consensus disorder prediction 217 275 - -
Dere04g1410 634 Gene3D Ribonuclease Inhibitor 27 211 IPR032675 -
Dere04g1410 634 Pfam Protein tyrosine and serine/threonine kinase 355 600 IPR001245 GO:0004672|GO:0006468
Dere04g1410 634 SUPERFAMILY Protein kinase-like (PK-like) 332 600 IPR011009 -
Dere04g1410 634 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Dere04g1410 634 ProSiteProfiles Protein kinase domain profile. 343 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1410 634 PANTHER PROTEIN MALE DISCOVERER 2 10 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1410 Dere-ChrDere04 15685486 15689838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1410 28 619 Receptor kinase-like Gene Family AT1G48480 27.727 4.33e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dere04g1410 PK_Tyr_Ser-Thr 5.2e-23 CL0016