Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1380 ATGGTTTCCAGAGAGCACAGCCACAAGAGAGCATCGCTGCATGAGAAGCTTCAACTCCTTCGTTCTATTACTAACTCTCATGCTCTAAACCAAACCTCGATCATAATGGATGCATCAAAGTATATCGCAGAACTAAAGCAAAAAGTTGAGAGGTTGAATCAAGACATAGCCACTGCACAAACTTCTAGTGACCGAAATCCCTTACCGATGGTGACAGTAGAAACCCTACAAAAAGGATATCTTATAAATGTTAATGCAGCAAAGAGTTGTCCAGGTCTGCTTGTATACGTATTGGAGGCCCTTGAAGGGATGAGTCTCAGTGTGCTGGAAGCTAGGGTTTCTTGTACAGACACTTTTCGATTTCAAGCAGTTGGAGAAGAAAGTGAAGAAGGTGTGAGTATGGATGCACAAGCTGTGAAACAAGCAGTGGGACAAGCTATAAAGAAATGGAGAGAAAATTCTACTGATGAACAGTAA 477 0.4193 MVSREHSHKRASLHEKLQLLRSITNSHALNQTSIIMDASKYIAELKQKVERLNQDIATAQTSSDRNPLPMVTVETLQKGYLINVNAAKSCPGLLVYVLEALEGMSLSVLEARVSCTDTFRFQAVGEESEEGVSMDAQAVKQAVGQAIKKWRENSTDEQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1380 158 Coils Coil 35 62 - -
Dere04g1380 158 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1380 Dere-ChrDere04 15449566 15450791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1380 13 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.861 5.92e-09 51.6