Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1367 ATGACTTTTAAGAGAAGGAACGGTGGGCGCAACAAGCATGGCCGTGGACACGTCAAATTCATTCGCTGTTCCAACTGTGGAAAATGTTGCCCAAAGGACAAGGCAATCAAAAGGTTTCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTTAGGGATGTTCAGGAAGCCTGTGTATATGAGCAGTACACCCTTCCAAAGCTGTATGTTAAGATGCAGTATTGCGTCTCCTGTGCAATTCACTCCCACGTTGTGAGGGTTCGATCCCGTACTGATAGGAGGAAGCGTGAACCTCCCCAGCGATTCATCAGGCGCAGGGATGATCTACCAAGGCCTGGTCAACCGGGTCAAGCGCCTCGTCCCGCCGGAGCAGCTTCTGCCCGTGCCTAA 387 0.5168 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDLPRPGQPGQAPRPAGAASARA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1367 128 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Dere04g1367 128 FunFam 40S ribosomal protein S26 1 114 - -
Dere04g1367 128 PANTHER 40S RIBOSOMAL PROTEIN S26 1 124 IPR000892 GO:0003735|GO:0005840|GO:0006412
Dere04g1367 128 Pfam Ribosomal protein S26e 1 105 IPR000892 GO:0003735|GO:0005840|GO:0006412
Dere04g1367 128 MobiDBLite consensus disorder prediction 86 128 - -
Dere04g1367 128 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Dere04g1367 128 MobiDBLite consensus disorder prediction 90 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1367 Dere-ChrDere04 15311699 15313235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1367 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.483 3.87e-70 204