LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere04g1365	ATGGTGATTGGGGATGGAGTTCTTACCCCAGCCATTTCTGGTATGGTTCCTCTTCCTATGAATGTTTTAACCAAAAAAAAAATGATCAAATTGGTGACTAGCGACTCCATTTCTGCAGTTTTTTCGGCAGTATCTGGTCTTGAGCTATCGATGTCCAAGGAACACCACCTATATGCTGTGGTTCCCATCACTTGCTTCATACTGCTGTGTTTGTTTGCCCTTCAACATTATGGCACACATCGAGTGGGATTCCTTTTTGCTCCAATTGTGGTGACATGGCTGTTATGCATCAGCACACTTGGTTTATATAATATCTTCAAATGGAATACGCATGTATATAAAGCTCTTTCACCATATTATATGTTCAAGTTCTTAAAGAAGACAAGGATCAGTGGATGGATGTCCTTGGGTGGAATATTATTGTGCATAACAGACTGCATTCACCTTTCTGGTATATCCTGCACTTCTATTGGCATATATGGGTCAAGCTGCTTACTTGTCAAACCATCACAGTACAAGTCACCGAATCAGTTTCTATATCTCGGTTCCAGGGCTAGCGGTGATGACTGTGATGCTAGTAACAACATGCCTTACTTCCTTGGCCATTATACTTTGCTGGCACAAACCTCCGATTATAGCACTTTGCTTCCTATTGTTGATGTTGATTCCTTTGAATCTCAACTAGTTGAAAAGCTAGCTGAGTTTATCCGCTATGATTGGGATAGAACACAAGGCACTAACTTGAACATTATTCAGGATGATTGTTCACACTCTAACGAATCCTCATGTCGTAGATTGACTGTGATTGGAACTGAGGAGAGTGTACAAAGTGTGATAGATGTTATTGAGATGGAAGAAGCAATGGATGGGGAAAAGAAAAGGGTGAGGTTTGCCATTGATGACGAGCCTGACGATGACATGAGGTCTGAAATGCAGGAAGAGCTGGAAGATCTTTGCGCTGCTAAAGAAGTTGGGACGGCATTCATTATTGGGCATTCTCACCTAAGAGCAAAGCAAGGGTCTTCCCTGTTGAAGAGATTGGCACTAAACTACGGGTATAATTTCCTGAGAAGGAACTGTAGAGGACCAGATGTGGCGCTTAAGGTTCCTCCAGCTTCTCTCCTGGAGGTTGGAATGGTTTATATTGTGTAG	1152	0.4219	MVIGDGVLTPAISGMVPLPMNVLTKKKMIKLVTSDSISAVFSAVSGLELSMSKEHHLYAVVPITCFILLCLFALQHYGTHRVGFLFAPIVVTWLLCISTLGLYNIFKWNTHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITDCIHLSGISCTSIGIYGSSCLLVKPSQYKSPNQFLYLGSRASGDDCDASNNMPYFLGHYTLLAQTSDYSTLLPIVDVDSFESQLVEKLAEFIRYDWDRTQGTNLNIIQDDCSHSNESSCRRLTVIGTEESVQSVIDVIEMEEAMDGEKKRVRFAIDDEPDDDMRSEMQEELEDLCAAKEVGTAFIIGHSHLRAKQGSSLLKRLALNYGYNFLRRNCRGPDVALKVPPASLLEVGMVYIV	383

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere04g1365	383	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	220	381	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere04g1365	383	Pfam	K+ potassium transporter	39	145	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere04g1365	Dere-ChrDere04	15278997	15281742	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere04g1365	220	383	Inorganic Solute Cotransporters	AT2G40540	54.688	6.24e-53	186