Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1352 ATGCTATCCATGGCCATTGATGAGATTGTGAAGGCATTTTTTGCCGCAAAAGAAAGGCTTCTGTTTTCCCATCACCAAACACCACCTTCTTCTTCCTTTGCTCAAACACAGCAGCTTCAGATGGGTTCAACTTCGCTAATGCAGGAATGGCTAATAAGGTCAAGTAATTATGCACAGCCTGTGGATCACTTGATTCAGACGCAGCAACTTCAAGCTGCACCAACGGAAGCATCACCCTCACGACTGCGAAGAAGGAAAGATGATTCGGAGAAGATGACAGTTATGGCTCCTGCACCTCAGTTTGGAAACACAGAGGTTCCACCGGAGGATGGTTTTACTTGGCGAAAATATGGCCAGAAAGAGATATTTGGCACTAAGTACCCAAGGAGTTACTACAGGTGCACCCACCAGAAATTATGTGAATGCGGAGCCAAGAAGCAAGTGCAGCGACTTGATCACAACCCTAACATATTTGCAATAACATACCGAGGTAGTCACAGTTGCATTATGTCCTCCATAGCCCCTTCATCAATTCCACCACCAAAAGTGCTACTTGATATCTCACAGCAGGATATGACCATTTCCTCTCAATTGTCTTCATCTTCAACTCCGGTTTCCCCGTGGCTGACCTCGGGGTACCGCAGCCTCCACGGTGGTGCCGCCACTGCTCCAGCCGGTGTAGATGCCGATAGTGCCATTGCAGGACCCTCCACTTCAAGATATGGTAGTAATACCGATTATCTAGCAGATATGGCTGATGCCATGTTTAATTCTGGTAGCAGTAGTGGTAACAGTACGATGGAATCACTCTTCCCATTCACTGAAGATAAATGA 834 0.4676 MLSMAIDEIVKAFFAAKERLLFSHHQTPPSSSFAQTQQLQMGSTSLMQEWLIRSSNYAQPVDHLIQTQQLQAAPTEASPSRLRRRKDDSEKMTVMAPAPQFGNTEVPPEDGFTWRKYGQKEIFGTKYPRSYYRCTHQKLCECGAKKQVQRLDHNPNIFAITYRGSHSCIMSSIAPSSIPPPKVLLDISQQDMTISSQLSSSSTPVSPWLTSGYRSLHGGAATAPAGVDADSAIAGPSTSRYGSNTDYLADMADAMFNSGSSSGNSTMESLFPFTEDK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1352 277 MobiDBLite consensus disorder prediction 69 90 - -
Dere04g1352 277 SUPERFAMILY WRKY DNA-binding domain 105 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g1352 277 Pfam WRKY DNA -binding domain 109 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1352 277 SMART WRKY_cls 108 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1352 277 Gene3D WRKY domain 98 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere04g1352 277 ProSiteProfiles WRKY domain profile. 109 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere04g1352 277 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 30 172 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1352 Dere-ChrDere04 15197817 15200220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1352 2 272 WRKY Transcription Factor Family AT2G40740 36.364 1.63e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere04g1352 WRKY 6.4e-25 CL0274