Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1339 ATGGACACAAATCAAGGCGTGCTCTCAGCTCTTGACAATGCCAAGACACAAGACTACCACTTCAAGGCAATTATCATAGCTGGGATGGGATTCTTCACTGATGCATATGATCTCTTCTGCATCACTGCTGTAACCAAGCTCTTAGGTCGCCTCTACTACTTCAACCCCACTTCTCATGACCCAGGAAAGCTTCCTCAGCAAGTAAACAACGCCATAACTGGGGTCGCCTTGTGCGGAACCCTGGCAGGGCAGCTCTTCTTTGGCTGGTTAGGTGACAAGCTTGGCAGGAAAAAAGTGTATGGGATCACTCTTGTTACAATGGTAGGATGTGCCTTGGCCTCAGGGCTTTCCTTTGGCTCCACATCAAAAAGTGTGGTTGCTACTCTCTGCTTCTTCAGGTTCTGGTTGGGATTTGGCATTGGAGGAGACTACCCTTTATCAGCTGTCATAATGTCTGAATATGCCAATCAGAAAACCCGAGGAGGGTTTGTTGCCGCTGTTTTTGCAATGCAAGGAGTGGGAATATTGGTTGCTGGAGCTGTAGCCATGGCTGTGTCCAGCTTGTTCTTAGCAGCCTACCCTGCTGATGATTTTCAAGCTGATCCTGTGAAGTCTACTCAACCAGAGGGTGATCTTGTTTGGCGAATTGTGCTCTTGTTTGGCGCGGTTCCCGCGGCTCTCACCTATTACTGGAGAATGAAAATGCCAGAAACTGCTAGATACACTGCACTGGTCGACGGTGACTACAAGAAGGCTGCTTCAGATATGGCCAAAGTTCTTCAAAAGGACAAAATTTCAGAAGATTCAAGTTCCAGGTTTGCTGTAAACCCAACCCCCTCTTATGGATTCCTCTCCTCTGAGTTTCTCGAGAAACATGGGGTTCACCTTCTTGGGACTACTAGCACATGGTTCTTGTTGGACGTTGCATTCTATAGTCTTCAACTCACACAGAAAGATCTATACCCAGCTAGTGGCCTTGTTCACAAAGCATCATCCATGAATGCCATAGAGGAGGTGTTTCAACTCTCCAGAGCTATGTTTGTGGTGGCCCTGTTAGCAACAGTTCCTGGCTACTGGTTCACAGTGTTTTTCATCGATAAAATTGGAAGGTACAGAATCCAGCTTGGTGGCTTCCTTCTGATGTCTATTTTTATGGCGATCCTTGGATATAATTATAGAGAATACAGGGGAGAGAAGAATAATTGCAATTCAGGAGAAAAAGAGTATTGCAATGGCAACCCTGTAATGTTTGTTCTATTATTTGGGCTAACCCTCTTCTTTGCTAACTTTGGCCCCAATAGTACAACATTTATATTGCCTGCAGAGCTATTCCCAGCTCGCTTTCGTTCAACATGTCATGGGATATCAGCGGCTGCGGGAAAAGCAGGTGCCATTATTGGTGCCTTTGTAGTGCAGAGCTATACCGGTAATGATTCAACAAAAAGGATCCAAAAGGCTATTATGGCACTTTCAGTCGTCAACTTGGCTGGATTCTTTTGTACCTTCTTGGTTCCAGAAACAAAAGGCCGATCACTGGAACAGATCTCGGGAGAAGATAAGGAACTCCATGGAAATGCTACTGTAGATGATGCAAATGTGAAAACAGAAGATGCAAAGGAGGACACTGGAAGCGCTGGTGTTGATAAATCTCCACCAGGAACCATAAATGTTTAG 1674 0.4552 MDTNQGVLSALDNAKTQDYHFKAIIIAGMGFFTDAYDLFCITAVTKLLGRLYYFNPTSHDPGKLPQQVNNAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLVTMVGCALASGLSFGSTSKSVVATLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGGFVAAVFAMQGVGILVAGAVAMAVSSLFLAAYPADDFQADPVKSTQPEGDLVWRIVLLFGAVPAALTYYWRMKMPETARYTALVDGDYKKAASDMAKVLQKDKISEDSSSRFAVNPTPSYGFLSSEFLEKHGVHLLGTTSTWFLLDVAFYSLQLTQKDLYPASGLVHKASSMNAIEEVFQLSRAMFVVALLATVPGYWFTVFFIDKIGRYRIQLGGFLLMSIFMAILGYNYREYRGEKNNCNSGEKEYCNGNPVMFVLLFGLTLFFANFGPNSTTFILPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYTGNDSTKRIQKAIMALSVVNLAGFFCTFLVPETKGRSLEQISGEDKELHGNATVDDANVKTEDAKEDTGSAGVDKSPPGTINV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1339 557 Gene3D MFS general substrate transporter like domains 19 533 IPR036259 -
Dere04g1339 557 NCBIfam phosphate:H+ symporter 10 518 IPR004738 GO:0005315|GO:0006817|GO:0016020
Dere04g1339 557 SUPERFAMILY MFS general substrate transporter 12 516 IPR036259 -
Dere04g1339 557 MobiDBLite consensus disorder prediction 515 544 - -
Dere04g1339 557 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 513 - -
Dere04g1339 557 Pfam Sugar (and other) transporter 25 516 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere04g1339 557 MobiDBLite consensus disorder prediction 515 557 - -
Dere04g1339 557 FunFam Inorganic phosphate transporter 1-6 19 529 - -
Dere04g1339 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Dere04g1339 557 CDD MFS_PhT 24 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1339 Dere-ChrDere04 15052478 15054151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1339 2 518 Inorganic Solute Cotransporters AT5G43360 61.290 0.0 660