Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1337 ATGCCATCAACTCCAACGATGCTAACTAGCAAGATGCTTCGCCCTTGGATGTGTTCATGGTGTCCTGGAATTGACTATCATACCAAGCTATGCCTTTTGTTTGCTTGCCTTTACTGGAGGAATCAGCTTGGTGTCTTCTGCAAAATGTTGATAATATCTGAGGTCAGACCTCGGTACCACCGCTTGCCTCAATTTTGCACCAAACAAGCACCCATGAAGTTCCAGTCCTCTATTTTTGCACTTTTCATTCTAAGCTTCCAACTGTGTCTCTTTGGCTTGATTATAGCTGACCTCAACTCTGACAGACAAGCTCTATATGAGTTTGCTTCCAATGTCCCACATGCCCCAAGACTGAATTGGAATGACTCTGCTGCAATTTGCACATCCTGGGTTGGAGTAACTTGCAACTTGGATGGAACCCGTGTCATTGGTATCCATCTTCCAGGATTTGGACTCACAGGCTCCATTCCAGAGAAGAACATAGCAAAACTAGATGCTCTTAGAGTCCTGAGCCTTCATTCCAATGGCCTTGCTGGAAATCTTCCTTCTGACATTTTGTCCATTCCTTCACTCCAATATGTACACCTTGAGCATAATAATTTCTCGGGTCTAATTCCTTCCTCTGTCTCCCCAAAACTCATTGCATTGGATATTTCCTTCAACTCCTTCTCTGGAAGTATACCACCTGCATTTCAGAATCTCAGAAGGCTCACATGGTTGTATCTCCAAAACAATTCCATTTCTGGAGCTATTCCTGACTTCAACCTTCCAAGACTCAAGTACTTGAATTTGAGCTATAACAACTTGAATGGCTCAATTCCAAGTTCCATAAAAAAATTCCCGTACACTGCTTTTGTTGGAAACTCTCTCTTATGTGGGCCACCTCTCAGTCATTGCTCTTTAGTCTCATCTTCACCATCTCCTTCCCCTGTTTATCAGCCACTCTCTCCAGCAACTACTCAAAGTCAAAAAGTTACCACCCACAAGAAAAACTTTGGAATAGCTTCTATACTTGCTCTAGCAATTGGGGGCTGCGCGTTTCTCTCTCTCATAGTTTTAGTGATCTCTATATGCTGTTTGAAGAGGAAAAAGAGTGAAAGCAGTGGCATACTGAAAGGAAAGGCGTCTTGTGCTGGAAAGACTGAGGTTTCAAAGAGCTTTGGGAGTGGGGTGCAAGCGGCTGAGAAGAACAAGTTGTTCTTCTTTGAAGGTTGCTCTTACAGCTTTGACCTGGAGGATTTGTTGAAGGCATCAGCTGAGGTTCTTGGAAAAGGGAGTTATGGAACAGCTTACAAGGCTGTTTTAGAGGAGGGAACAACAGTGGTTGTTAAAAGGTTGAGGGAAGTTGTGGTTGGAAAGAAGGAGTTTGAGCAGCAGATGGAAATTGTAGGGAGGATTGGAAGGCACCCTAATGTCATGCCCCTCCGAGCTTATTACTATTCTAAAGATGAGAAACTTCTAGTTTACAACTACATGCCAGGCGGCAGTTTGTTCTCCTTGTTGCATGGAAACGGGGGTGCAGGAAGAACTCCATTAGACTGGAATGCAAGAATGAAGATAGCACTTGGGACAATAAAAGGAATTGCTTTCATTCATTCCGAAGGAGGTGCCAAATTTACACATGGCAACATCAAATCTTCCAACATCCTCATCACCCAAGACCTCGATGGTTGCATCTCGGACGTTGGATTGACCCCTCTGATGAACAACCCTGCAACCATTTCCAGATCCAACGGCTATCGCGCTCCAGAGGTGACCGATCAACGGAAAGTCACCCAGAAATCAGACGTATACAGCTACGGCGTGCTTCTTCTAGAAATGCTGACAGGAAAGAGCCCAATGAGATATCCTGGGTATGATGATGTCGTTGATCTGCCACGGTGGGTGAAGTCGGTGGTTCGCGAGGAATGGACAGCTGAAGTATTCGATGAGGAGATATTAAGAGGTCGGTATGTCGAAGAGGAAATGGTACAGGTGCTTCAGATTGCCCTGGCCTGTGTGGCGAAAGCTCCAGATATGAGGCCAAGAATAGATGAAGCTGTAAGAATGATGGAAGAAATTGCGCAGCCTGAGTTGAAGAACAGGCCATCCTCTGAATCTACGTCTGGTGTGCAAACTCCATGA 2124 0.4496 MPSTPTMLTSKMLRPWMCSWCPGIDYHTKLCLLFACLYWRNQLGVFCKMLIISEVRPRYHRLPQFCTKQAPMKFQSSIFALFILSFQLCLFGLIIADLNSDRQALYEFASNVPHAPRLNWNDSAAICTSWVGVTCNLDGTRVIGIHLPGFGLTGSIPEKNIAKLDALRVLSLHSNGLAGNLPSDILSIPSLQYVHLEHNNFSGLIPSSVSPKLIALDISFNSFSGSIPPAFQNLRRLTWLYLQNNSISGAIPDFNLPRLKYLNLSYNNLNGSIPSSIKKFPYTAFVGNSLLCGPPLSHCSLVSSSPSPSPVYQPLSPATTQSQKVTTHKKNFGIASILALAIGGCAFLSLIVLVISICCLKRKKSESSGILKGKASCAGKTEVSKSFGSGVQAAEKNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVVVGKKEFEQQMEIVGRIGRHPNVMPLRAYYYSKDEKLLVYNYMPGGSLFSLLHGNGGAGRTPLDWNARMKIALGTIKGIAFIHSEGGAKFTHGNIKSSNILITQDLDGCISDVGLTPLMNNPATISRSNGYRAPEVTDQRKVTQKSDVYSYGVLLLEMLTGKSPMRYPGYDDVVDLPRWVKSVVREEWTAEVFDEEILRGRYVEEEMVQVLQIALACVAKAPDMRPRIDEAVRMMEEIAQPELKNRPSSESTSGVQTP 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1337 707 MobiDBLite consensus disorder prediction 693 707 - -
Dere04g1337 707 Pfam Leucine rich repeat 189 247 IPR001611 GO:0005515
Dere04g1337 707 MobiDBLite consensus disorder prediction 687 707 - -
Dere04g1337 707 Pfam Leucine rich repeat N-terminal domain 99 136 IPR013210 -
Dere04g1337 707 FunFam Nuclear pore complex protein NUP107 98 253 - -
Dere04g1337 707 FunFam pollen receptor-like kinase 1 384 491 - -
Dere04g1337 707 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 698 - -
Dere04g1337 707 Gene3D Transferase(Phosphotransferase) domain 1 492 703 - -
Dere04g1337 707 Gene3D Ribonuclease Inhibitor 100 210 IPR032675 -
Dere04g1337 707 ProSiteProfiles Protein kinase domain profile. 416 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1337 707 Gene3D Ribonuclease Inhibitor 211 300 IPR032675 -
Dere04g1337 707 PANTHER OS05G0588300 PROTEIN 81 698 - -
Dere04g1337 707 CDD STKc_IRAK 422 687 - -
Dere04g1337 707 SUPERFAMILY Protein kinase-like (PK-like) 420 685 IPR011009 -
Dere04g1337 707 Pfam Leucine Rich Repeat 258 280 IPR001611 GO:0005515
Dere04g1337 707 ProSitePatterns Protein kinases ATP-binding region signature. 422 453 IPR017441 GO:0005524
Dere04g1337 707 Pfam Protein kinase domain 420 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1337 707 Gene3D Phosphorylase Kinase; domain 1 382 491 - -
Dere04g1337 707 SUPERFAMILY L domain-like 111 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1337 Dere-ChrDere04 15042858 15047303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1337 63 702 Receptor kinase-like Gene Family AT5G58300 57.477 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere04g1337 Pkinase 1.7e-36 CL0016