Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1287 ATGGCTCTCGAAGCATTCGCAGATAGCTGGGACCCACAAAGTGCCACTTGTCTCACAAGAAATATCTCAATTCAAGAGAGAGAACCAGATCTGCTTGCTGACGTGGATCACATGGGCCAGTGCCATCAAGGTACGAAGATATTTTGCTATTGGAGATATTTTCTTAAGCCGTTGGATTTGAGGCGGTTGCCTTTGGAATACTCATTCGACGCCGTCGGATGTTCAAGAGAGGGTGAAAGTGAAAGGCTGAGAGGTTGTGTGGGAAATATGGGGGATGTGGTGTTGAGTGCTGAGAGAGTAGTGGAAGCCAAGGAGAAGGAGAAGACAGAGGAGGAGGAGAGTGGAACAGAGAGTAAAGGAGGAGAATTGAATGGTTTGATGAGGTGGGAGAAGTTCTTGCCCAGGATGACATTGAGGGTTCTGTTGGTTGAAGCCGATGATTCTACCCGCCAAATTATTGCTGCGCTTCTCAGAAAATGCAGCTACAGAGTGGCCGCTGTTCCTGATGGCTTGAAGGCATGGGAATTGCTGAAGGGAAGACCACACAATATCGACCTGATACTGACAGAAGTGGATTTGCCTTCCATATCGGGCTATGCTTTTCTCACACTAATTATGGAGCACGAGATTTGCAAAAACATTCCTGTTATAATGATGTCCTCGCATGATTCGATTAGCACAGTATACAAGTGCATGTTGAAAGGTGCTGCTGACTATCTTGTCAAGCCCATCAGAAAAAATGAGCTCAGGAATTTGTGGCAGCATGTTTGGAGAAGGCGATCATCAAGAATTGGTGTAAGCGGTCCACAAGATGAGAGTGTTGCACAACAGAAGGTTGAAGCCACTGCTGAAAACAATGCTGCTAGTCAGTCAAGTGGAGATGCTGCTTGCATTCAAAAAAATAAGGAATTAATTGAGAAAGAAAGTGATGCTCAGAGCTCTTGTACAAAGCCCGACTTGGAAGCAGAAAGTGCCCCTGTGGAAAATGTGCAGGAATTTGCTCACCTAAGATGTGCTGAGTCATACCCAAGTGAAAAAAAGATTCAGGAGGTTGAAACGTGTTTTCATTTAGGCCACACATCAGTCATGCATGATATTTATGCTGGAGGAATGACTGTGGGTATCTGCAAAAATGGTGAGACAAGCATAAGTCATGGCAAGGATGGTGGTCTAGAGCATCATAGTAGAGCTAGTAACAGCGGTGAGGCTCATGACAATCACTATGTTCAAATTAGCTCTTCTAAGGAAGCTATTGACTTGATTGGAGCATTTCGTACTCATCCAAACTGCAGTCTCAAAAGTTCCACAGTTAATTGCACAGGCAAGTTGGACTTCTCCCCACAATTAGCTCTTTCCTTGAGAAGGTATCATCCCAGCAACTACGAGAATGAAGTCACCGAAGAAAGGCATACCCTCATGCATTCTAATGCCTCAGCTTTCAAGCAGTATACGAACAGACAATTGCAAGCAAAACCTGCAGGTTTCATTAACTTCCGTGATCCACAAAGAGAACAGAGAACAAATTGTGAGATAAATATCTCCCATGTTACCACTGGTCATAATTCAGATAGTTCAACACCTAGCATGCAAAGAAGTATTGTGTCACCCACTACAGCCCAATCTAGAGAATCCAAACTTGCCAGTTCACAATCCCAGCAAGCGCATTCTCTCCCAATTCCAGTAAAAGGCATAAGGTTCAACGATCTATGCAAAGCCTATGGTTCTGTCATTCCTCCAATGTTTAGTACAGAGTCAGGTCCACCATCAATGCTGAGTCCGAGTTCAGTTGTGCACCTTGCACCTACCTTTCAAACGAATGCATATTATCAATCTAATGTCAAAGAGCAAAGTTCAGAGCAGCATTATGAACCACGAAGTCAAAATGTAAGCAGCCCTGCAACCATAAACCACATTGTTTACATGCAAGATCACAAATTGGAACATGTTGAAGATCAAGGACATATCTCTCCTACAACTGATCAAAGTGAAAGTGGTAGTTTCTGTAATGGAAATGTGAGCCGCATGAACAGCAGCATTGGCTATGGAAGCAACTGTGGAAGTAACAGCAATGTTGATCAGGCTGCCATGGTTAGGACAGCTCCAGATGTTAAGAATGAAGATCTTTCACCCAATGCAAATTCTCATCGATCGGTTCAAAGAGAAGCAGCTCTTAACAAGTTTCGTTTGAAAAGGAAAGAGAGATGCTACGAGAAGAAGGTCCGGTATGAGAGCAGAAAGAAACTTGCAGAGCAGCGTCCCAGGGTGAAAGGACAATTTGTTCGTCAACTGCAACCTGAGCCCCAGGCTGTAGAAAAAGATGGCTGA 2325 0.4409 MALEAFADSWDPQSATCLTRNISIQEREPDLLADVDHMGQCHQGTKIFCYWRYFLKPLDLRRLPLEYSFDAVGCSREGESERLRGCVGNMGDVVLSAERVVEAKEKEKTEEEESGTESKGGELNGLMRWEKFLPRMTLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWELLKGRPHNIDLILTEVDLPSISGYAFLTLIMEHEICKNIPVIMMSSHDSISTVYKCMLKGAADYLVKPIRKNELRNLWQHVWRRRSSRIGVSGPQDESVAQQKVEATAENNAASQSSGDAACIQKNKELIEKESDAQSSCTKPDLEAESAPVENVQEFAHLRCAESYPSEKKIQEVETCFHLGHTSVMHDIYAGGMTVGICKNGETSISHGKDGGLEHHSRASNSGEAHDNHYVQISSSKEAIDLIGAFRTHPNCSLKSSTVNCTGKLDFSPQLALSLRRYHPSNYENEVTEERHTLMHSNASAFKQYTNRQLQAKPAGFINFRDPQREQRTNCEINISHVTTGHNSDSSTPSMQRSIVSPTTAQSRESKLASSQSQQAHSLPIPVKGIRFNDLCKAYGSVIPPMFSTESGPPSMLSPSSVVHLAPTFQTNAYYQSNVKEQSSEQHYEPRSQNVSSPATINHIVYMQDHKLEHVEDQGHISPTTDQSESGSFCNGNVSRMNSSIGYGSNCGSNSNVDQAAMVRTAPDVKNEDLSPNANSHRSVQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQLQPEPQAVEKDG 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1287 774 Gene3D - 136 364 - -
Dere04g1287 774 PANTHER TWO-COMPONENT RESPONSE REGULATOR 138 434 IPR045279 GO:0009736
Dere04g1287 774 SMART REC_2 138 253 IPR001789 GO:0000160
Dere04g1287 774 SUPERFAMILY CheY-like 132 263 IPR011006 -
Dere04g1287 774 MobiDBLite consensus disorder prediction 103 118 - -
Dere04g1287 774 ProSiteProfiles Response regulatory domain profile. 139 257 IPR001789 GO:0000160
Dere04g1287 774 MobiDBLite consensus disorder prediction 516 555 - -
Dere04g1287 774 ProSiteProfiles CCT domain profile. 720 762 IPR010402 GO:0005515
Dere04g1287 774 Pfam CCT motif 720 762 IPR010402 GO:0005515
Dere04g1287 774 CDD psREC_PRR 140 243 - -
Dere04g1287 774 MobiDBLite consensus disorder prediction 103 122 - -
Dere04g1287 774 Coils Coil 94 114 - -
Dere04g1287 774 Pfam Response regulator receiver domain 140 251 IPR001789 GO:0000160
Dere04g1287 774 MobiDBLite consensus disorder prediction 745 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1287 Dere-ChrDere04 14635636 14640559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1287 715 764 Response Regulator Gene Family AT5G24470 84.000 1.95e-20 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Dere04g1287 Response_reg 9.1e-22 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1287 04 14635636 14640559 Dere04g1287 04 14635636 14640559 ECH