Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1277 ATGGGGAAGGCAGGAGGAGGCTCTTGGTTGAATGCTGTGAAAAGGGCCTTCAGGTCTCCGACCAAAGAAAAGGACGAGAGAAGCAGCAGGAGGAGAGAAGAACATGAACAAGAGGAGGAGGAGAAGAAGAGGGGTAAACGAAGATGGATCTTCAGAAAGCCCTTTAGCCAAGAAACAATTACCCAGCATTGTGAAGAAAGAACCATAACAACTATAGCTGACGTGACAGCAACAAGTTGTGAGGCAATTGAGGAGGCAGAACAAAGACATGCGATTGCAGTAGCCATGGCAACCACAGCTGCTGCTCAGGCTGCAGTAGCAACTGCTCAAGCAGCTGTGGAGGTCGTTCGCCTTGCTAAGCCTTCCTTCTTTGTCAGAGAACACAATTCAGCCATTGTTATCCAAACAGCATTCAGAGGCTATCTGGCAAGGAGAGCTCTTGGGGCACTTAAAGGATTAGTGAAGCTGCAAGCATTAATAAGAGGTCATAATGTACGAAAACAAGCTAAACTAACACTTGCGTGCATGCAAGCTCTTGTTCGAGTTCAAACTCGAGTATGCCAAGAGCGAGCCAAGCGGCTTTCACAGTACGAAAGAAACACCAATTCTAGAGATGGTAGTGGGACAGAGGAAGTGAGGATGCACTGGGATGGCCACCCACAAACAGTAGATAATATTCGAGCTGTTCTACAGAGAACAAAAGAAGTTGCCTTGAAACGTGAAAAGTCCCTGGCTCATGCCTTCTCTCATCAGATATGGAGAACTAATCGAGAAACCAGTGCCAGCGAGGGAGAGGATGAAGACAGAGACAGCCCCATATGGAGGAGAAGGTATAGGGAGAACAGAGGTAGAGCTTCGTGTGATCAAAGAGACCCCATCAAAATAGTTGAAATTGACACATATAGACCCTACTCTAACCCTGTTCACACAGATCAAGAGAGATCATATTGTGGGTATAAACCCCACTTCAATAAACCACCGAGGCTTTCTTTGTCATCGCCTGGGCATCATAAAGCCCACTACGATATCTCAATGGCAGTGACACCACCATCAATGAAGATCAACCATTTTGAGGTACGATCAGCTAGTCCTCCTGGTGCAAAGTCCAACCTCTTAATGCCAAACTATATGGCAGCCACTGCATCTGCTAAGGCTCGGTTTCGCTCACAAGGTGCACCCACACACATGAATTCAGCCCCAGAAAAGGAAAAAGCAGGATCCATCAAGAAACGCCTTTCATTCCCAGCTCCATATTCCTGTGATGGTGTGGGCAATGGAGGATCTATTGTGTAG 1293 0.4695 MGKAGGGSWLNAVKRAFRSPTKEKDERSSRRREEHEQEEEEKKRGKRRWIFRKPFSQETITQHCEERTITTIADVTATSCEAIEEAEQRHAIAVAMATTAAAQAAVATAQAAVEVVRLAKPSFFVREHNSAIVIQTAFRGYLARRALGALKGLVKLQALIRGHNVRKQAKLTLACMQALVRVQTRVCQERAKRLSQYERNTNSRDGSGTEEVRMHWDGHPQTVDNIRAVLQRTKEVALKREKSLAHAFSHQIWRTNRETSASEGEDEDRDSPIWRRRYRENRGRASCDQRDPIKIVEIDTYRPYSNPVHTDQERSYCGYKPHFNKPPRLSLSSPGHHKAHYDISMAVTPPSMKINHFEVRSASPPGAKSNLLMPNYMAATASAKARFRSQGAPTHMNSAPEKEKAGSIKKRLSFPAPYSCDGVGNGGSIV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1277 430 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Dere04g1277 430 Pfam IQ calmodulin-binding motif 154 170 IPR000048 GO:0005515
Dere04g1277 430 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Dere04g1277 430 Pfam Protein of unknown function (DUF4005) 349 424 IPR025064 -
Dere04g1277 430 SMART iq_5 149 170 IPR000048 GO:0005515
Dere04g1277 430 SMART iq_5 126 148 IPR000048 GO:0005515
Dere04g1277 430 Gene3D - 126 178 - -
Dere04g1277 430 MobiDBLite consensus disorder prediction 17 45 - -
Dere04g1277 430 MobiDBLite consensus disorder prediction 1 45 - -
Dere04g1277 430 PANTHER IQ-DOMAIN 5-RELATED 1 416 - -
Dere04g1277 430 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1277 Dere-ChrDere04 14507928 14509556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1277 1 417 IQD Protein Family AT1G01110 37.702 3.76e-76 244